RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 EDNRAP25101 427 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 GCAP28676 217 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 PKNOX1P55347 436 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 SNRPD2P62316 118 aaKnown RBP15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 PHC1P78364 1004 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 POU6F2P78424 691 aaPredicted RBP15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 MLC1Q15049 377 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 DUSP5Q16690 384 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 CCNJQ5T5M9 372 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 OR7E24Q6IFN5 339 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 LRIG3Q6UXM1 1119 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 TMCO5AQ8N6Q1 288 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 FAM76AQ8TAV0 307 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 OCEL1Q9H607 264 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 ASB6Q9NWX5 421 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 TAS2R16Q9NYV7 291 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 TMEFF2Q9UIK5 374 aaPredicted RBP15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 NOSIPQ9Y314 301 aaKnown RBP15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 TRAF6Q9Y4K3 522 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 ACTL7BQ9Y614 415 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 H3BQF6 201 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 SMAD9O15198 467 aaKnown RBP15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 PRKCAP17252 672 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 LCP2Q13094 533 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 C3orf33Q6P1S2 294 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 ZCCHC12Q6PEW1 402 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 CBLN3Q6UW01 205 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 C3orf56Q8N813 242 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 EIF1ADQ8N9N8 165 aaKnown RBP15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 SGMS2Q8NHU3 365 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 RFWD2Q8NHY2 731 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 CCDC126Q96EE4 140 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 L3HYPDHQ96EM0 354 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 OTUB1Q96FW1 271 aaPredicted RBP15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 TMEM237Q96Q45 408 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 KCNA7Q96RP8 456 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 VRK1Q99986 396 aaPredicted RBP15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 HOXD1Q9GZZ0 328 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 ICAM5Q9UMF0 924 aa15.64■□□□□ 0.09
TSPAN3-208ENST00000560514 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 CCR4P51679 360 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 ACTG1P63261 375 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 CSNK2A1P68400 391 aaPredicted RBP15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 TOMM34Q15785 309 aaPredicted RBP15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 SLC46A3Q7Z3Q1 461 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 ZNF614Q8N883 585 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 TOR1AIP2Q8NFQ8 470 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 GPR119Q8TDV5 335 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 ZNF75CPQ92670 426 aaPredicted RBP15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 CIDECQ96AQ7 238 aaPredicted RBP15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 GIMAP5Q96F15 307 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 SORCS2Q96PQ0 1159 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 BTBD2Q9BX70 525 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 TXLNGYQ9BZA5 131 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 BHLHE41Q9C0J9 482 aaPredicted RBP15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 BPESC1Q9GZL8 116 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 SERINC1Q9NRX5 453 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 GIN1Q9NXP7 522 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 METRNQ9UJH8 293 aa15.63■□□□□ 0.09
TSPAN3-208ENST00000560514 KCNAB3O43448 404 aa15.62■□□□□ 0.09
TSPAN3-208ENST00000560514 CRCPO75575 148 aa15.62■□□□□ 0.09
TSPAN3-208ENST00000560514 RNF144AP50876 292 aaPredicted RBP15.62■□□□□ 0.09
TSPAN3-208ENST00000560514 NOXRED1Q6NXP6 359 aa15.62■□□□□ 0.09
TSPAN3-208ENST00000560514 PPCDCQ96CD2 204 aa15.62■□□□□ 0.09
TSPAN3-208ENST00000560514 ZHX1-C8orf76Q96EF9 292 aa15.62■□□□□ 0.09
TSPAN3-208ENST00000560514 RRAGDQ9NQL2 400 aaPredicted RBP15.62■□□□□ 0.09
TSPAN3-208ENST00000560514 PSMC3IPQ9P2W1 217 aaPredicted RBP15.62■□□□□ 0.09
TSPAN3-208ENST00000560514 NPIPA5A0A0B4J1W7 369 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 NPIPA7E9PJI5 369 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 SULT2B1O00204 365 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 OIP5O43482 229 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 MRPL33O75394 65 aaKnown RBP15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 NPIPA8P0DM63 369 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 PCMT1P22061 227 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 DIO1P49895 249 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 CBFBQ13951 182 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 QPRTQ15274 297 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 FAM174BQ3ZCQ3 159 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 ANKRD26P1Q6NSI1 321 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 HOMEZQ8IX15 550 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 ZFAND2BQ8WV99 257 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 C16orf58Q96GQ5 468 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 MUS81Q96NY9 551 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 STACQ99469 402 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 KCNS3Q9BQ31 491 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 MID1IP1Q9NPA3 183 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 SH3BP4Q9P0V3 963 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 AMDHD2Q9Y303 409 aa15.61■□□□□ 0.09
TSPAN3-208ENST00000560514 A0A0A6YYJ9 748 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 LRP5LA4QPB2 252 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 ATP6V1G2-DDX39BF2Z307 99 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 SLCO1B7G3V0H7 640 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 GPR171O14626 319 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 RSL1D1O76021 490 aaKnown RBP15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 SNUPNO95149 360 aaKnown RBP15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 CHN2P52757 468 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 PDK3Q15120 406 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 GABRA6Q16445 453 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 SWI5Q1ZZU3 235 aa15.6■□□□□ 0.09
TSPAN3-208ENST00000560514 NDUFAF6Q330K2 333 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms