RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CARD8Q9Y2G2 431 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 UBR5O95071 2799 aaPredicted RBP12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 AQP12BA6NM10 295 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 GJE1A6NN92 205 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 B4DXG7 233 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 ARPC2O15144 300 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 C1QCP02747 245 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 LINGO3P0C6S8 592 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 PABPC4LP0CB38 370 aaKnown RBP12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF708P17019 499 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 SLC7A1P30825 629 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 PRKAR1BP31321 381 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 HTR3AP46098 478 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 LHX2P50458 406 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 MTPNP58546 118 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 RAC1P63000 192 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 SCARB2Q14108 478 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 MAPK14Q16539 360 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 CBLN3Q6UW01 205 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 CYP2R1Q6VVX0 501 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 B3GNT6Q6ZMB0 384 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF550Q7Z398 422 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 FJX1Q86VR8 437 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 LACC1Q8IV20 430 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 AQP12AQ8IXF9 295 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 MEIOBQ8N635 442 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 TMCO5AQ8N6Q1 288 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 GPR119Q8TDV5 335 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 WDYHV1Q96HA8 205 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 SH3YL1Q96HL8 342 aaPredicted RBP12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 UCN2Q96RP3 112 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 DMRTA2Q96SC8 542 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 ECSITQ9BQ95 431 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 IKZF5Q9H5V7 419 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 CALHM2Q9HA72 323 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 PNPLA3Q9NST1 481 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 RIMS3Q9UJD0 308 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 ERRFI1Q9UJM3 462 aaPredicted RBP12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 SLC6A5Q9Y345 797 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 FREM3P0C091 2139 aa12.65□□□□□ -0.38
PKNOX1-209ENST00000560448 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 OR2M5A3KFT3 312 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 CDHR4A6H8M9 788 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 CD8B2A6NJW9 211 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 PYCARD-AS1I3L0S3 204 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 LDLRP01130 860 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 NUDT7P0C024 238 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 UBTFL6P0CB48 400 aaPredicted RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 B3GALT5-AS1P59052 145 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 RPS3AP61247 264 aaKnown RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 VEZF1Q14119 521 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 ADRM1Q16186 407 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 EMC4Q5J8M3 183 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 C1orf185Q5T7R7 199 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 OGFRL1Q5TC84 451 aaPredicted RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF585AQ6P3V2 769 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 XKRXQ6PP77 449 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 ARSKQ6UWY0 536 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 CHMP1BQ7LBR1 199 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 PATL1Q86TB9 770 aaKnown RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 DNAJC9Q8WXX5 260 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 ZG16BQ96DA0 208 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 REXO5Q96IC2 774 aaKnown RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 RSRC1Q96IZ7 334 aaKnown RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF583Q96ND8 569 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 ZFP3Q96NJ6 502 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 KCTD14Q9BQ13 255 aaPredicted RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 COQ3Q9NZJ6 369 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 EGFL7Q9UHF1 273 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 USP22Q9UPT9 525 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 VDAC3Q9Y277 283 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF443Q9Y2A4 671 aaPredicted RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 RPH3AQ9Y2J0 694 aaPredicted RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 SNX13Q9Y5W8 968 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 HIVEP3Q5T1R4 2406 aa12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 HELZ2Q9BYK8 2649 aaKnown RBP12.64□□□□□ -0.39
PKNOX1-209ENST00000560448 CENPVL1A0A0U1RR11 272 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 TCRBV5S2A0A599 114 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 SEMA7AO75326 666 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 EPPINO95925 133 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 PRKCAP17252 672 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 PSMA4P25789 261 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 PCGF2P35227 344 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 TIMP3P35625 211 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 GZMMP51124 257 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 CCR4P51679 360 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 PCBP3P57721 371 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 EEF1A1P68104 462 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 SELENBP1Q13228 472 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 VMACQ2NL98 169 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF311Q5JNZ3 666 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 PDSS1Q5T2R2 415 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 MRPL2Q5T653 305 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 EEF1A1P5Q5VTE0 462 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 NSUN5P2Q63ZY6 315 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 DHRS4L2Q6PKH6 230 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms