RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 J3QRE1 110 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 AQP9O43315 295 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 AKAP8O43823 692 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 HCN1O60741 890 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 ADAM11O75078 769 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 RFPL3O75679 317 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 LALBAP00709 142 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 MSL3P1P0C860 447 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 PAICSP22234 425 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 RBM34P42696 430 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 HSD17B7P56937 341 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 FUT7Q11130 342 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 DEFB133Q30KQ1 61 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 ZNF791Q3KP31 576 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 TCTE1Q5JU00 501 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 SLC35F1Q5T1Q4 408 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 CD200R1LQ6Q8B3 271 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 THSD4Q6ZMP0 1018 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 MEPCEQ7L2J0 689 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 ZNF550Q7Z398 422 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 METTL27Q8N6F8 245 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 ZFP41Q8N8Y5 198 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 OR51G2Q8NGK0 314 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 MED18Q9BUE0 208 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 CCDC32Q9BV29 185 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 PDE7BQ9NP56 450 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 CMC2Q9NRP2 79 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 ERVK-19Q9WJR5 959 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 GSTK1Q9Y2Q3 226 aa13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 CAB39Q9Y376 341 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-212ENST00000559974 CFAP54Q96N23 3096 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 OR2W5A6NFC9 320 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 LRRTM2O43300 516 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 PTP4A3O75365 173 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 PTTG1O95997 202 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 CT45A8P0DMV1 189 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 CT45A9P0DMV2 189 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 FGF9P31371 208 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 SLC9A3P48764 834 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 TGM4P49221 684 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 PGDP52209 483 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 ATP12AP54707 1039 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 PSMD4P55036 377 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 PSPHP78330 225 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 FOXK2Q01167 660 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 FABP5Q01469 135 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 CT45A2Q5DJT8 189 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 ALG10BQ5I7T1 473 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 WDR45BQ5MNZ6 344 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 ARMC4Q5T2S8 1044 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 OR51Q1Q8NH59 317 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 C16orf52Q8NHV5 167 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 SPRYD4Q8WW59 207 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 NACC2Q96BF6 587 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 WDFY2Q96P53 400 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 SDHCQ99643 169 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 CHRNA10Q9GZZ6 450 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 OR10A5Q9H207 317 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 TRAPPC4Q9Y296 219 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 CABIN1Q9Y6J0 2220 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 TRAV27A0A087WT01 109 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 TRDV1A0A1B0GX56 115 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 SLC35F4A4IF30 521 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 FITM1A5D6W6 292 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 LMO7DNF2Z398 122 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 H0YIG0 161 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 SDC2P34741 201 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 HNRNPA0Q13151 305 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 NNATQ16517 81 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 ZNF322Q6U7Q0 402 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 LAX1Q8IWV1 398 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 CMIPQ8IY22 773 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 CADM3Q8N126 398 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 ASB15Q8WXK1 588 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 ARRDC1-AS1Q9H2J1 176 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 MED20Q9H944 212 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 EPHA6Q9UF33 1036 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 BAIAP2Q9UQB8 552 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 CMAHPQ9Y471 501 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 TMEM184BQ9Y519 407 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 MPDZO75970 2070 aa13.32□□□□□ -0.28
RABGGTA-212ENST00000559974 ZFHX2Q9C0A1 2572 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 SYNDIG1LA6NDD5 238 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 PRR23D1E9PI22 279 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 SDC3O75056 442 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 IFNA16P05015 189 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 NGFRP08138 427 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 CLEC2LP0C7M8 214 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 PRR23D2P0DMB1 279 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 GALNSP34059 522 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 AFF3P51826 1226 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 NXPH1P58417 271 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 DEFA1P59665 94 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 DEFA3P59666 94 aa13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 KRR1Q13601 381 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-212ENST00000559974 C14orf28Q4W4Y0 310 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms