RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 A0A1B0GX12 115 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 ACOT7O00154 380 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 FFAR1O14842 300 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 SUSD5O60279 629 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 HCN1O60741 890 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 FZD7O75084 574 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 GMNNO75496 209 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 ZNF682O95780 498 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 GPIP06744 558 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 CHMP24386 653 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 OR1E2P47887 323 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 RGS8P57771 180 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 SESN3P58005 492 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 FOXK1P85037 733 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 HOXC5Q00444 222 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 QPRTQ15274 297 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 TRILQ7L0X0 811 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 SLCO4A1Q96BD0 722 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 C3orf49Q96BT1 292 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 DTNBP1Q96EV8 351 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 DHRS1Q96LJ7 313 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 ZNF559Q9BR84 538 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 TRIM2Q9C040 744 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 CACYBPQ9HB71 228 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 NDUFAF4Q9P032 175 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 LUZP4Q9P127 313 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 SLC9A8Q9Y2E8 581 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 SH3GLB1Q9Y371 365 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 LIPGQ9Y5X9 500 aa13.4□□□□□ -0.26
SNRPA1-207ENST00000559309 OR2M5A3KFT3 312 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 FAM166BA8MTA8 275 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 LINC01387J3KSC0 135 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 CDC40O60508 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 THRBP10828 461 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 HOXB6P17509 224 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 GDF1P27539 372 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 ELK4P28324 431 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 EIF1P41567 113 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 IDH2P48735 452 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 PLGLB1Q02325 96 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 SLC10A1Q14973 349 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 OR1Q1Q15612 314 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 PRR30Q53SZ7 412 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 VASNQ6EMK4 673 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 WBP2NLQ6ICG8 309 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF613Q6PF04 617 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 PLEKHM3Q6ZWE6 761 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 GRINAQ7Z429 371 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 FGD2Q7Z6J4 655 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 ATG4DQ86TL0 474 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 ADGRG3Q86Y34 549 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 CISD2Q8N5K1 135 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 NEIL3Q8TAT5 605 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 SLC38A4Q969I6 547 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 TPD52L3Q96J77 140 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 JSRP1Q96MG2 331 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 GPR137Q96N19 417 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF300Q96RE9 604 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 PRSS27Q9BQR3 290 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 FUZQ9BT04 418 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 PRR14Q9BWN1 585 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 TRIM15Q9C019 465 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 CCM2LQ9NUG4 571 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 ENPP4Q9Y6X5 453 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF407Q9C0G0 2248 aa13.39□□□□□ -0.27
SNRPA1-207ENST00000559309 PTPN13Q12923 2485 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 A0A1B0GWA3 101 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 NPIPB7O75200 414 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 OR5F1O95221 314 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 IFNW1P05000 195 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 HK1P19367 917 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 FUT4P22083 530 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 APOBEC1P41238 236 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 HTR3AP46098 478 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF41P51814 821 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 MAP2K6P52564 334 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 ALDH6A1Q02252 535 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 FOXF1Q12946 379 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 KRTCAP3Q53RY4 240 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 WIPI1Q5MNZ9 446 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 ENTPD8Q5MY95 495 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 FAM180AQ6UWF9 173 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 RANBP3LQ86VV4 465 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 CANT1Q8WVQ1 401 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 TMEM234Q8WY98 164 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 PRRC1Q96M27 445 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 RAB3IPQ96QF0 476 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 MCHR1Q99705 422 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 UGT2B28Q9BY64 529 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 DENND2DQ9H6A0 471 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 MAN2C1Q9NTJ4 1040 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 ASF1BQ9NVP2 202 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 OSGIN1Q9UJX0 560 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 VDAC3Q9Y277 283 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 COL12A1Q99715 3063 aa13.38□□□□□ -0.27
SNRPA1-207ENST00000559309 DHRS12A0PJE2 317 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 AQP7O14520 342 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 TFECO14948 347 aaPredicted RBP13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 CYP7B1O75881 506 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms