RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 KCNK9Q9NPC2 374 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 OLAHQ9NV23 265 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 LYARQ9NX58 379 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 BCAP29Q9UHQ4 241 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TINAGQ9UJW2 476 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SNX6Q9UNH7 406 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 YARS2Q9Y2Z4 477 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 NCOA6Q14686 2063 aaPredicted RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 MED12LQ86YW9 2145 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ARHGAP21Q5T5U3 1957 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 HCFC1P51610 2035 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 PTPN13Q12923 2485 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 PHF3Q92576 2039 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 CACNA1CQ13936 2221 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 PKDREJQ9NTG1 2253 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 TRGV8A0A0C4DH27 118 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 GOLGA8QA0A0J9YX86 632 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 GNG14A0A1W2PPG7 69 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 GOLGA8OA6NCC3 632 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 ASPDHA6ND91 283 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 FAM90A18PA6NE21 464 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 FAM90A16PA6NEW6 464 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 FAM90A9PA6NNJ1 464 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 FAM90A5PA8MXJ8 464 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 MYO1GB0I1T2 1018 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 NPIPA2E9PIF3 369 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 GOLGA8NF8WBI6 632 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 NPIPA3F8WFD2 350 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 PRYO14603 147 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 ZNF195O14628 629 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 LSM1O15116 133 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 RGS16O15492 202 aaPredicted RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 OR10H2O60403 315 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CDC40O60508 579 aaKnown RBP eCLIP3.85□□□□□ -1.79
SPG11-211ENST00000558561 UGT2B11O75310 529 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 ACTL6BO94805 426 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 GLSO94925 669 aaPredicted RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 SEMA3DO95025 777 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 KRT6AP02538 564 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 OPN1LWP04000 364 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 KRT6BP04259 564 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 FAM90A15PP0C7V4 464 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 FAM90A14PP0C7W9 464 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CT45A8P0DMV1 189 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CT45A9P0DMV2 189 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 LAMP1P11279 417 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 BCKDHAP12694 445 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 PRF1P14222 555 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 SDC1P18827 310 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 GPX3P22352 226 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 TCEA1P23193 301 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 GSTM2P28161 218 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 DUSP1P28562 367 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 IL12AP29459 219 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 THBS4P35443 961 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 MAGEA5P43359 124 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 KRT6CP48668 564 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 TRPC1P48995 793 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 STARP49675 285 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CDK9P50750 372 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 DIO3P55073 304 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 PKNOX1P55347 436 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 NME5P56597 212 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 MAGOHP61326 146 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 PPIAP62937 165 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 PLIN5Q00G26 463 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 SRSF4Q08170 494 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 BST1Q10588 318 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CSTF3Q12996 717 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 SERTAD2Q14140 314 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 PTGR1Q14914 329 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 KPNB1Q14974 876 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 EIPR1Q53HC9 387 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 TTMPQ5BVD1 217 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CT45A2Q5DJT8 189 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CFAP157Q5JU67 520 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 C6orf136Q5SQH8 315 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 SH2D4BQ5SQS7 431 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 IL23RQ5VWK5 629 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 RTL6Q6ICC9 239 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 HMGN2P46Q86SG4 172 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 DDIASQ8IXT1 998 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CLYBLQ8N0X4 340 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 CYP4Z2PQ8N1L4 340 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 LIX1Q8N485 282 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 SLC5A8Q8N695 610 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 BCORP1Q8N888 145 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 ST6GALNAC3Q8NDV1 305 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 OR2M7Q8NG81 312 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 OR5M1Q8NGP8 315 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 OR14A16Q8NHC5 309 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 RDH11Q8TC12 318 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 TWIST2Q8WVJ9 160 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 GLMPQ8WWB7 406 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 PIK3R3Q92569 461 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 AKAP1Q92667 903 aaKnown RBP eCLIP3.85□□□□□ -1.79
SPG11-211ENST00000558561 DAZLQ92904 295 aaKnown RBP3.85□□□□□ -1.79
SPG11-211ENST00000558561 HGDQ93099 445 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 TLCD1Q96CP7 247 aa3.85□□□□□ -1.79
SPG11-211ENST00000558561 KLHL29Q96CT2 875 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms