RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 MID1O15344 667 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 SLC19A2O60779 497 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 HIST1H1TP22492 207 aaPredicted RBP11.43□□□□□ -0.58
LDLR-205ENST00000557933 HTR2AP28223 471 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 GDNFP39905 211 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 BLVRAP53004 296 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 DUSP5Q16690 384 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 PUS10Q3MIT2 529 aaKnown RBP11.43□□□□□ -0.58
LDLR-205ENST00000557933 DEFB134Q4QY38 66 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 ZNF836Q6ZNA1 936 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 NLRC3Q7RTR2 1065 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 LIX1LQ8IVB5 337 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 ZNRF4Q8WWF5 429 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 TRAF4Q9BUZ4 470 aaPredicted RBP11.43□□□□□ -0.58
LDLR-205ENST00000557933 POT1Q9NUX5 634 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 SIDT1Q9NXL6 827 aaKnown RBP11.43□□□□□ -0.58
LDLR-205ENST00000557933 ADAM18Q9Y3Q7 739 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 A0A1B0GTH9 108 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 FMO6PO60774 539 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 TPOP07202 933 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 BMP7P18075 431 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 RAB3BP20337 219 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 SOX2P48431 317 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 EXOSC7Q15024 291 aaKnown RBP11.43□□□□□ -0.58
LDLR-205ENST00000557933 RTL4Q6ZR62 310 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 ZAR1Q86SH2 424 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 OR2A1Q8NGT9 310 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 OR5K2Q8NHB8 316 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 ELP4Q96EB1 424 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 TEAD3Q99594 435 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 MICU1Q9BPX6 476 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 PINK1Q9BXM7 581 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 APOBEC3BQ9UH17 382 aaKnown RBP11.43□□□□□ -0.58
LDLR-205ENST00000557933 GNG8Q9UK08 70 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 RAD1O60671 282 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 MOSPD3O75425 235 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 ASGR2P07307 311 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 TMIGD3P0DMS9 266 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 IFNGR2P38484 337 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 PLA2G7Q13093 441 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 DHCR24Q15392 516 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 DUSP6Q16828 381 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 NDUFAF6Q330K2 333 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 TCTE1Q5JU00 501 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 RNLSQ5VYX0 342 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 OR5M10Q6IEU7 315 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 CD300LDQ6UXZ3 194 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 CFAP77Q6ZQR2 320 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 HOMEZQ8IX15 550 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 RPLP0P6Q8NHW5 317 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 ST8SIA2Q92186 375 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 MS4A6EQ96DS6 147 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 LRIG1Q96JA1 1093 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 NDC1Q9BTX1 674 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 SPATA5L1Q9BVQ7 753 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 C20orf85Q9H1P6 137 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 KCNK15Q9H427 330 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 KLHL28Q9NXS3 571 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 SERGEFQ9UGK8 458 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 A0A1W2PPL8 197 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 PRR23D1E9PI22 279 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 TSPAN9O75954 239 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 IGHA1P01876 353 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 PRR23D2P0DMB1 279 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 CSNK2A2P19784 350 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 DCTDP32321 178 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 GALEQ14376 348 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 MFSD13AQ14CX5 517 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 YOD1Q5VVQ6 348 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 FRRS1Q6ZNA5 592 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 IDO2Q6ZQW0 420 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 MEPCEQ7L2J0 689 aaKnown RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 PRSS41Q7RTY9 318 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 SLC44A3Q8N4M1 653 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 OR4E2Q8NGC2 313 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 OR6K6Q8NGW6 343 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 OR52I2Q8NH67 350 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 SMPDL3BQ92485 455 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 BADQ92934 168 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 KISS1RQ969F8 398 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 OR1F2PQ96R84 312 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 TNFRSF13CQ96RJ3 184 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 ZBP1Q9H171 429 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 TSPAN10Q9H1Z9 355 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 IL21RQ9HBE5 538 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 MGAT4CQ9UBM8 478 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 OBSL1O75147 1896 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 LRRC72A6NJI9 287 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 G3V3Q6 166 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 ARPC5O15511 151 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 TFP02787 698 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 POU2F2P09086 479 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 F3P13726 295 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 PCSK2P16519 638 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 HK1P19367 917 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 FPR3P25089 353 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 ATP5A1P25705 553 aaKnown RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 REEP5Q00765 189 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 FOXK2Q01167 660 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms