RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 DLEU7Q6UYE1 221 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 DHDDSQ86SQ9 333 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 LIX1LQ8IVB5 337 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 MSRB3Q8IXL7 192 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF440Q8IYI8 595 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 LILRA2Q8N149 483 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 NAXEQ8NCW5 288 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 OR52P1PQ8NH57 321 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF563Q8TA94 476 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 BBS10Q8TAM1 723 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 TMEM19Q96HH6 336 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 KLHL15Q96M94 604 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 NPAS1Q99742 590 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 TREX2Q9BQ50 279 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-211ENST00000557623 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 SFXN3Q9BWM7 321 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 BCL2L10Q9HD36 194 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 SAR1AQ9NR31 198 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 SERINC1Q9NRX5 453 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 IFT52Q9Y366 437 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 DSPPQ9NZW4 1301 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 COL12A1Q99715 3063 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 SPTAN1Q13813 2472 aaKnown RBP11.24□□□□□ -0.61
SLIRP-211ENST00000557623 BBIP1A8MTZ0 92 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 H0YC42 278 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 ADAMDEC1O15204 470 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 SLC22A2O15244 555 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 SYNGR4O95473 234 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 NTN1O95631 604 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 ARAFP10398 606 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 UQCRBP14927 111 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 CD1EP15812 388 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 EIF1AXP47813 144 aaKnown RBP11.23□□□□□ -0.61
SLIRP-211ENST00000557623 ASCL1P50553 236 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 TPD52P55327 224 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-211ENST00000557623 DLX5P56178 289 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 SESN3P58005 492 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 TFF3Q07654 80 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 SF3A3Q12874 501 aaKnown RBP eCLIP11.23□□□□□ -0.61
SLIRP-211ENST00000557623 KLF10Q13118 480 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 PON3Q15166 354 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 MMEL1Q495T6 779 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 COQ5Q5HYK3 327 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 MRPL2Q5T653 305 aaKnown RBP11.23□□□□□ -0.61
SLIRP-211ENST00000557623 HMGN2P46Q86SG4 172 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 OR10D3Q8NH80 312 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 OR2V1Q8NHB1 315 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 C10orf82Q8WW14 230 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 ANKRD27Q96NW4 1050 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 CGREF1Q99674 301 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 SPOCK3Q9BQ16 436 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 CPPED1Q9BRF8 314 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-211ENST00000557623 PRRG4Q9BZD6 226 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
SLIRP-211ENST00000557623 ENKD1Q9H0I2 346 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 TMEM38AQ9H6F2 299 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 TIGARQ9NQ88 270 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 ACER3Q9NUN7 267 aa11.23□□□□□ -0.61
SLIRP-211ENST00000557623 FOXD3Q9UJU5 478 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-211ENST00000557623 MCTS1Q9ULC4 181 aaKnown RBP11.23□□□□□ -0.61
SLIRP-211ENST00000557623 A0A0J9YW62 118 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CLDN24A6NM45 220 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 FAAHO00519 579 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 TNFSF11O14788 317 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CCDC22O60826 627 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 PGM3O95394 542 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 TGM6O95932 706 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 NPPAP01160 153 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 ETS2P15036 469 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 SLC6A2P23975 617 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 FKBP2P26885 142 aaKnown RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 RYKP34925 604 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 SFTPDP35247 375 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 PEX19P40855 299 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 APOBEC1P41238 236 aaKnown RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 HTR3AP46098 478 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CDK6Q00534 326 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 MERTKQ12866 999 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CYLC2Q14093 348 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CTU2Q2VPK5 515 aaKnown RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 RPS26P11Q5JNZ5 115 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 RNF220Q5VTB9 566 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 HBMQ6B0K9 141 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 REEP3Q6NUK4 255 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 C3orf33Q6P1S2 294 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 POMZP3Q6PJE2 187 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 PLEKHM3Q6ZWE6 761 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF550Q7Z398 422 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 GRINAQ7Z429 371 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 VRK2Q86Y07 508 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 KRT73Q86Y46 540 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 RELL2Q8NC24 303 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 SLC25A43Q8WUT9 341 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 FIG4Q92562 907 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CNOT9Q92600 299 aaKnown RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 MAL2Q969L2 176 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CPNE4Q96A23 557 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 INTS12Q96CB8 462 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms