RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 MTTPP55157 894 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 SRYQ05066 204 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 IFFO1Q0D2I5 559 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 CD226Q15762 336 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 SNCBQ16143 134 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 PARP6Q2NL67 630 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 ADPRMQ3LIE5 342 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 ZNF506Q5JVG8 444 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 LINC00242Q5T6M2 205 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 FAM219BQ5XKK7 198 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 REP15Q6BDI9 236 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 ARMCX5Q6P1M9 558 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 ERASQ7Z444 233 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 TMCO2Q7Z6W1 182 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-212ENST00000557477 ZBTB44Q8NCP5 570 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 MAIP1Q8WWC4 291 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 SLC25A36Q96CQ1 311 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 MTMR9Q96QG7 549 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 TGS1Q96RS0 853 aaKnown RBP3.67□□□□□ -1.82
PRPF39-212ENST00000557477 C19orf43Q9BQ61 176 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 TTYH2Q9BSA4 534 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 MTG1Q9BT17 334 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-212ENST00000557477 WRAP53Q9BUR4 548 aaKnown RBP3.67□□□□□ -1.82
PRPF39-212ENST00000557477 DRC3Q9H069 523 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 RNF41Q9H4P4 317 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-212ENST00000557477 ELL3Q9HB65 397 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-212ENST00000557477 GDAP2Q9NXN4 497 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 GPR83Q9NYM4 423 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 ANKMY1Q9P2S6 941 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 MLXQ9UH92 298 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 FOXJ3Q9UPW0 622 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 MYH8P13535 1937 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 FOCADQ5VW36 1801 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 DNAH12Q6ZR08 3092 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 CDK5RAP2Q96SN8 1893 aa3.67□□□□□ -1.82
PRPF39-212ENST00000557477 MYH15Q9Y2K3 1946 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 LRIT2A6NDA9 550 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 H0YL77 283 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 K7EPI3 171 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 IMPA2O14732 288 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 NDC80O14777 642 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 PRKAB2O43741 272 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 SMPD2O60906 423 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 PFDN1O60925 122 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 SMIM24O75264 130 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 CRLF1O75462 422 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 SCGB2A1O75556 95 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 TOM1L1O75674 476 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 PDE5AO76074 875 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 TOXO94900 526 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 VENTXO95231 258 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 DIRAS3O95661 229 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 NDUFB10O96000 172 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 MT-ND1P03886 318 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 MELTFP08582 738 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 RRASP10301 218 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 NCF1P14598 390 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-212ENST00000557477 TSPAN8P19075 237 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 ANXA13P27216 316 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 ALDH3A1P30838 453 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 POU3F4P49335 361 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 PGFP49763 221 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 CSRP3P50461 194 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 MFAP2P55001 183 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 HERVK_113P63132 956 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 ERVK-8P63133 956 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 NOP14P78316 857 aaKnown RBP3.66□□□□□ -1.82
PRPF39-212ENST00000557477 PRKCEQ02156 737 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 BCL2A1Q16548 175 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 LPAL2Q16609 132 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 C17orf58Q2M2W7 97 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 KRT71Q3SY84 523 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 C14orf28Q4W4Y0 310 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 VWA2Q5GFL6 755 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 ZSCAN25Q6NSZ9 544 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 PNCKQ6P2M8 343 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 FAM173BQ6P4H8 233 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 APOOLQ6UXV4 268 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 P4HA3Q7Z4N8 544 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 SLC25A42Q86VD7 318 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 CENPSQ8N2Z9 138 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 ZNF485Q8NCK3 441 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 OR52J3Q8NH60 311 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 PHOSPHO2Q8TCD6 241 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 IFT81Q8WYA0 676 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 DLX4Q92988 240 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-212ENST00000557477 FAM173AQ9BQD7 235 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 RIOK1Q9BRS2 568 aaKnown RBP3.66□□□□□ -1.82
PRPF39-212ENST00000557477 RBM24Q9BX46 236 aaKnown RBP3.66□□□□□ -1.82
PRPF39-212ENST00000557477 ERVK-6Q9BXR3 956 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 VAT1LQ9HCJ6 419 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 ESM1Q9NQ30 184 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 FAM114A2Q9NRY5 505 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 MBD2Q9UBB5 411 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 EPS15L1Q9UBC2 864 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 KIAA1257Q9ULG3 409 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 MGAT4BQ9UQ53 548 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.66□□□□□ -1.82
PRPF39-212ENST00000557477 GBF1Q92538 1859 aa3.66□□□□□ -1.82
PRPF39-212ENST00000557477 MUC3AQ02505 3323 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms