RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 SERPINB7O75635 380 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 FAM107AO95990 144 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 IL2RAP01589 272 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 GP1BBP13224 206 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 IL11P20809 199 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 AQP1P29972 269 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 PRDX6P30041 224 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 CHRNB4P30926 498 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 PRKAR1BP31321 381 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 PCGF2P35227 344 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 TPD52P55327 224 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-228ENST00000557302 EPS8Q12929 822 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 ART3Q13508 389 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 SEM1Q6ZVN7 128 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 ARPINQ7Z6K5 226 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 ADGRE4PQ86SQ3 457 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 GGNQ86UU5 652 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 GRAMD2AQ8IUY3 354 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 CCDC71Q8IV32 467 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-228ENST00000557302 SLC30A8Q8IWU4 369 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 LILRA2Q8N149 483 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 CLIP4Q8N3C7 705 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 ANKS4BQ8N8V4 417 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 CA5BP1Q8WTZ4 195 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 ZNF524Q96C55 264 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 LRRC37BQ96QE4 947 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 UCN2Q96RP3 112 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 PIF1Q9H611 641 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 ACER3Q9NUN7 267 aa12.24□□□□□ -0.45
SHMT2-228ENST00000557302 ICE1Q9Y2F5 2266 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 A0A0G2JNJ9 132 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 MBD3L4A6NDZ8 208 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 MBD3L3A6NE82 208 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 PRORSD1PA6NEY8 169 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 MBD3L5A6NJ08 208 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 GJE1A6NN92 205 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 HSPB2A8KAH6 182 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 FAAHO00519 579 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 AP3D1O14617 1153 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 ADAM11O75078 769 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 TOXO94900 526 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 OPN1LWP04000 364 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 GKN3PP0CG01 181 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 CEACAM8P31997 349 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 SFTPDP35247 375 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 TIMP3P35625 211 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 IDH2P48735 452 aaKnown RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 NUDT2P50583 147 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 GZMMP51124 257 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 DLX5P56178 289 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 CLDN15P56746 228 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 MERTKQ12866 999 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 SELENBP1Q13228 472 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 HSPB2Q16082 182 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 VMACQ2NL98 169 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 PDSS1Q5T2R2 415 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 INTS11Q5TA45 600 aaKnown RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 DHRS4L2Q6PKH6 230 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 HACD2Q6Y1H2 254 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 ESPNLQ6ZVH7 1005 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 PLEKHM3Q6ZWE6 761 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 ZNF550Q7Z398 422 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 GRINAQ7Z429 371 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 ARMC8Q8IUR7 673 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 TNIP2Q8NFZ5 429 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 MBD3L2Q8NHZ7 208 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 WNT2BQ93097 391 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 SLC35B4Q969S0 331 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 REXO5Q96IC2 774 aaKnown RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 KLHL15Q96M94 604 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 TM9SF2Q99805 663 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 PINK1Q9BXM7 581 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 SERINC1Q9NRX5 453 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 PAQR5Q9NXK6 330 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 CLCF1Q9UBD9 225 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 Q9UFV3 132 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 AP3M1Q9Y2T2 418 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 CHST2Q9Y4C5 530 aa12.23□□□□□ -0.45
SHMT2-228ENST00000557302 NCOA6Q14686 2063 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-228ENST00000557302 HEATR5AQ86XA9 2040 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 PHF3Q92576 2039 aaKnown RBP12.22□□□□□ -0.45
SHMT2-228ENST00000557302 SLC22A20A6NK97 555 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 TNFSF11O14788 317 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 ADAMDEC1O15204 470 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 EFNA2O43921 213 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 CLDN14O95500 239 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 CLDN1O95832 211 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 APOBEC1P41238 236 aaKnown RBP12.22□□□□□ -0.45
SHMT2-228ENST00000557302 SLC1A3P43003 542 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 HTR3AP46098 478 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 EIF1AXP47813 144 aaKnown RBP12.22□□□□□ -0.45
SHMT2-228ENST00000557302 PCBP3P57721 371 aaKnown RBP12.22□□□□□ -0.45
SHMT2-228ENST00000557302 COPZ1P61923 177 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 SGCBQ16585 318 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 TMEM176BQ3YBM2 270 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-228ENST00000557302 C3orf33Q6P1S2 294 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 ERICH5Q6P6B1 374 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 POMZP3Q6PJE2 187 aa12.22□□□□□ -0.45
SHMT2-228ENST00000557302 MAMDC2Q7Z304 686 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-228ENST00000557302 P4HA3Q7Z4N8 544 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms