RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ZNF48Q96MX3 618 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-220ENST00000557037 FRG2BQ96QU4 278 aa10.77□□□□□ -0.69
PSEN1-220ENST00000557037 BBS4Q96RK4 519 aa10.77□□□□□ -0.69
PSEN1-220ENST00000557037 ATOH8Q96SQ7 321 aa10.77□□□□□ -0.69
PSEN1-220ENST00000557037 ZNF665Q9H7R5 613 aa10.77□□□□□ -0.69
PSEN1-220ENST00000557037 SEC61A2Q9H9S3 476 aa10.77□□□□□ -0.69
PSEN1-220ENST00000557037 ZNF275Q9NSD4 429 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-220ENST00000557037 C19orf53Q9UNZ5 99 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-220ENST00000557037 MRPL33O75394 65 aaKnown RBP10.76□□□□□ -0.69
PSEN1-220ENST00000557037 KCNH1O95259 989 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 H6PDO95479 791 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 JUNP05412 331 aaKnown RBP10.76□□□□□ -0.69
PSEN1-220ENST00000557037 CALCRP30988 508 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 GP5P40197 560 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 KRTAP10-3P60369 221 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 NAAAQ02083 359 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 HGFACQ04756 655 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 DLG1Q12959 904 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 SLC29A2Q14542 456 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 TUSC1Q2TAM9 212 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 STEAP4Q687X5 459 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 C11orf87Q6NUJ2 197 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 C1orf52Q8N6N3 182 aaKnown RBP10.76□□□□□ -0.69
PSEN1-220ENST00000557037 C1orf162Q8NEQ5 155 aaPredicted RBP10.76□□□□□ -0.69
PSEN1-220ENST00000557037 GPR151Q8TDV0 419 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 YIPF5Q969M3 257 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 ZNF524Q96C55 264 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 UBXN10Q96LJ8 280 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 LMF2Q9BU23 707 aaKnown RBP10.76□□□□□ -0.69
PSEN1-220ENST00000557037 KATNB1Q9BVA0 655 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 C3orf14Q9HBI5 128 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 EQTNQ9NQ60 294 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 SLC35C2Q9NQQ7 365 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 FARSBQ9NSD9 589 aaKnown RBP10.76□□□□□ -0.69
PSEN1-220ENST00000557037 UPB1Q9UBR1 384 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 DCTN4Q9UJW0 460 aa10.76□□□□□ -0.69
PSEN1-220ENST00000557037 IGKV3D-15A0A087WSY6 115 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 ZNF716A6NP11 495 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 KIF2AO00139 706 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-220ENST00000557037 UPK1AO00322 258 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 CECR9P0C854 216 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 HPGDP15428 266 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 STMN1P16949 149 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 ACHEP22303 614 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 CXCR5P32302 372 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 TUBA1BP68363 451 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 TUBA4AP68366 448 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 TGFBR3Q03167 851 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 ZNF117Q03924 483 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 IFT88Q13099 833 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 PFKFB4Q16877 469 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 PRSS53Q2L4Q9 553 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 AVPI1Q5T686 147 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 ABLIM2Q6H8Q1 611 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 CASP12Q6UXS9 341 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 TUBA1AQ71U36 451 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 ANKMY2Q8IV38 441 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 RIBC1Q8N443 379 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-220ENST00000557037 OR4F15Q8NGB8 312 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 FBXO30Q8TB52 745 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 JADE3Q92613 823 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 RDH5Q92781 318 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 ATP6V1E2Q96A05 226 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 GPA33Q99795 319 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 NOL11Q9H8H0 719 aaKnown RBP10.75□□□□□ -0.69
PSEN1-220ENST00000557037 BEX1Q9HBH7 125 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 HHATLQ9HCP6 504 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 SLC7A10Q9NS82 523 aa10.75□□□□□ -0.69
PSEN1-220ENST00000557037 DDX18Q9NVP1 670 aaKnown RBP10.75□□□□□ -0.69
PSEN1-220ENST00000557037 RYR2Q92736 4967 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 A0A087WV62 115 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 VSTM5A8MXK1 200 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 OR7A17O14581 309 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 SKAP2O75563 359 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-220ENST00000557037 PSMG1O95456 288 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 NGFRP08138 427 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 GFAPP14136 432 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 PRKCAP17252 672 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 MPIP34949 423 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 DIO1P49895 249 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 NCBP2P52298 156 aaKnown RBP eCLIP10.74□□□□□ -0.692e-8■■□□□ 11.9
PSEN1-220ENST00000557037 TMEM33P57088 247 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 LOXL3P58215 753 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 TRA2BP62995 288 aaKnown RBP10.74□□□□□ -0.69
PSEN1-220ENST00000557037 MVKQ03426 396 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 SELENBP1Q13228 472 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 SAXO2Q658L1 398 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 OLFML2AQ68BL7 652 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 ANKRD16Q6P6B7 361 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 CBLN3Q6UW01 205 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 ZNF771Q7L3S4 317 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-220ENST00000557037 SAMD14Q8IZD0 417 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-220ENST00000557037 DNAJA3Q96EY1 480 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 ZNF442Q9H7R0 627 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 GUCA1BQ9UMX6 200 aa10.74□□□□□ -0.69
PSEN1-220ENST00000557037 GPC6Q9Y625 555 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-220ENST00000557037 CLDN34H7C241 214 aa10.73□□□□□ -0.69
PSEN1-220ENST00000557037 SULT2B1O00204 365 aa10.73□□□□□ -0.69
PSEN1-220ENST00000557037 SCDO00767 359 aa10.73□□□□□ -0.69
PSEN1-220ENST00000557037 RAG2P55895 527 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms