RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 CLIP4Q8N3C7 705 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 PCYOX1LQ8NBM8 494 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 OR10D3Q8NH80 312 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 OR2V1Q8NHB1 315 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 MBD3L2Q8NHZ7 208 aaPredicted RBP15.37■□□□□ 0.05
PSEN1-217ENST00000556533 FNDC9Q8TBE3 224 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 ST8SIA1Q92185 356 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 LRRC58Q96CX6 371 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 ARMC7Q9H6L4 198 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 CHST11Q9NPF2 352 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 EXOSC3Q9NQT5 275 aaKnown RBP15.37■□□□□ 0.05
PSEN1-217ENST00000556533 SERINC1Q9NRX5 453 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 IFT52Q9Y366 437 aa15.37■□□□□ 0.05
PSEN1-217ENST00000556533 DIDO1Q9BTC0 2240 aaKnown RBP15.37■□□□□ 0.05
PSEN1-217ENST00000556533 FLNBO75369 2602 aaKnown RBP15.37■□□□□ 0.05
PSEN1-217ENST00000556533 CDHR4A6H8M9 788 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 C19orf84I3L1E1 186 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 DVL2O14641 736 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 SLC22A2O15244 555 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 CXCL13O43927 109 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 SNX3O60493 162 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 ADAM11O75078 769 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 SYNGR4O95473 234 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 COX4I1P13073 169 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 CCNA2P20248 432 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 CTSSP25774 331 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 ELK4P28324 431 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 ZNF136P52737 540 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 CARD18P57730 90 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 EEF1A1P68104 462 aaKnown RBP15.36■□□□□ 0.05
PSEN1-217ENST00000556533 FOXF2Q12947 444 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 COQ5Q5HYK3 327 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 PRAMEF8Q5VWM4 474 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 PRAMEF7Q5VXH5 474 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 ZNF787Q6DD87 383 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 NANOGP8Q6NSW7 305 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 PLEKHM3Q6ZWE6 761 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 KRT73Q86Y46 540 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 METTL25Q8N6Q8 603 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 OR10A6Q8NH74 314 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 OSTF1Q92882 214 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 RCN3Q96D15 328 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 KLHL15Q96M94 604 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 UCN2Q96RP3 112 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 SPATA9Q9BWV2 254 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 TMEM38AQ9H6F2 299 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 NANOGQ9H9S0 305 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 GID8Q9NWU2 228 aa15.36■□□□□ 0.05
PSEN1-217ENST00000556533 FREM3P0C091 2139 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 GJE1A6NN92 205 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 AIM2O14862 343 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 ADAMDEC1O15204 470 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 DNAJA2O60884 412 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 RCBTB2O95199 551 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 NTN1O95631 604 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 THBS1P07996 1170 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 PABPC4LP0CB38 370 aaKnown RBP15.35■□□□□ 0.05
PSEN1-217ENST00000556533 TFPIP10646 304 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 UQCRBP14927 111 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 SLC7A1P30825 629 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 SLC25A53Q5H9E4 307 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 RABL3Q5HYI8 236 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 ESPNLQ6ZVH7 1005 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 PTOV1Q86YD1 416 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 ZNF440Q8IYI8 595 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 CADM2Q8N3J6 435 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 C11orf65Q8NCR3 313 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 RP9Q8TA86 221 aaKnown RBP15.35■□□□□ 0.05
PSEN1-217ENST00000556533 ZNF607Q96SK3 696 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 SH3GL1Q99961 368 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 ECSITQ9BQ95 431 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 CCDC106Q9BWC9 280 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 KAT8Q9H7Z6 458 aaKnown RBP15.35■□□□□ 0.05
PSEN1-217ENST00000556533 CTPS2Q9NRF8 586 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 ANGPT4Q9Y264 503 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 MED12Q93074 2177 aa15.35■□□□□ 0.05
PSEN1-217ENST00000556533 A0A1W2PNR3 127 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 EEF1E1-BLOC1S5C9J1V9 151 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 EEF1E1O43324 174 aaKnown RBP15.34■□□□□ 0.05
PSEN1-217ENST00000556533 FRS3O43559 492 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 SERPINB7O75635 380 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 PRG2P13727 222 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 ETS2P15036 469 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 OPRM1P35372 400 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 APOBEC1P41238 236 aaKnown RBP15.34■□□□□ 0.05
PSEN1-217ENST00000556533 HOXC5Q00444 222 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 EPS8Q12929 822 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 SELENBP1Q13228 472 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 CTU2Q2VPK5 515 aaKnown RBP15.34■□□□□ 0.05
PSEN1-217ENST00000556533 SLC25A35Q3KQZ1 300 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 RNF220Q5VTB9 566 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 TREML1Q86YW5 311 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 CNEP1R1Q8N9A8 125 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 HIPK4Q8NE63 616 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 ADGRG7Q96K78 797 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 OR5B2Q96R09 309 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 SPATA5L1Q9BVQ7 753 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 TIGARQ9NQ88 270 aa15.34■□□□□ 0.05
PSEN1-217ENST00000556533 ZNF629Q9UEG4 869 aaPredicted RBP15.34■□□□□ 0.05
PSEN1-217ENST00000556533 MCTS1Q9ULC4 181 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms