RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 OR5B2Q96R09 309 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 C20orf27Q9GZN8 174 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 ZNF350Q9GZX5 532 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 SERINC1Q9NRX5 453 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 KLHL9Q9P2J3 617 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 RAI1Q7Z5J4 1906 aaPredicted RBP20.08■□□□□ 0.8
ACTN1-220ENST00000556433 USF3Q68DE3 2245 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 PRSS51A0A1B0GVH4 220 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF814B7Z6K7 855 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 C9JVG2 144 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 DNAJA2O60884 412 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 SCN2BO60939 215 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 UBTFL6P0CB48 400 aaPredicted RBP20.07■□□□□ 0.8
ACTN1-220ENST00000556433 OR12D1P0DN82 309 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 UQCRC2P22695 453 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 SLC1A6P48664 564 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 SESN3P58005 492 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 PHC1P78364 1004 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 P2RY6Q15077 328 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 ATAD3BQ5T9A4 648 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 ANXA8L1Q5VT79 327 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 HEPHL1Q6MZM0 1159 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 EIF3MQ7L2H7 374 aaKnown RBP20.07■□□□□ 0.8
ACTN1-220ENST00000556433 MREGQ8N565 214 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 RAB3IL1Q8TBN0 382 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 MIPOL1Q8TD10 442 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 TMEM234Q8WY98 164 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 ST8SIA1Q92185 356 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 HSD17B8Q92506 261 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 KISS1RQ969F8 398 aaPredicted RBP20.07■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF775Q96BV0 537 aaPredicted RBP20.07■□□□□ 0.8
ACTN1-220ENST00000556433 CXorf56Q9H5V9 222 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 BCO1Q9HAY6 547 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 SSU72Q9NP77 194 aaKnown RBP20.07■□□□□ 0.8
ACTN1-220ENST00000556433 NGBQ9NPG2 151 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 ING1Q9UK53 422 aaPredicted RBP20.07■□□□□ 0.8
ACTN1-220ENST00000556433 FREM1Q5H8C1 2179 aa20.07■□□□□ 0.8
ACTN1-220ENST00000556433 SNUPNO95149 360 aaKnown RBP20.06■□□□□ 0.8
ACTN1-220ENST00000556433 H6PDO95479 791 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 AGR2O95994 175 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 PGCP20142 388 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 RASGEF1BQ0VAM2 473 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 MERTKQ12866 999 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 ITGADQ13349 1161 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 CAPRIN1Q14444 709 aaKnown RBP20.06■□□□□ 0.8
ACTN1-220ENST00000556433 TAB1Q15750 504 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 MAPK14Q16539 360 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 C3orf33Q6P1S2 294 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 TNFAIP8L2Q6P589 184 aaPredicted RBP20.06■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF619Q8N2I2 560 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 RAB8BQ92930 207 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 SORT1Q99523 831 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 PSD2Q9BQI7 771 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 ACER3Q9NUN7 267 aa20.06■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF701Q9NV72 531 aaPredicted RBP20.06■□□□□ 0.8
ACTN1-220ENST00000556433 SMAD9O15198 467 aaKnown RBP20.05■□□□□ 0.8
ACTN1-220ENST00000556433 TM9SF1O15321 606 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 TMCC2O75069 709 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 CNOT4O95628 575 aaKnown RBP20.05■□□□□ 0.8
ACTN1-220ENST00000556433 DHRS4L1P0CG22 281 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 PAX1P15863 534 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 LBPP18428 481 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 BHLHA15Q7RTS1 189 aaPredicted RBP20.05■□□□□ 0.8
ACTN1-220ENST00000556433 USB1Q9BQ65 265 aaKnown RBP20.05■□□□□ 0.8
ACTN1-220ENST00000556433 NUF2Q9BZD4 464 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 CENPHQ9H3R5 247 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 ESRP2Q9H6T0 727 aaKnown RBP20.05■□□□□ 0.8
ACTN1-220ENST00000556433 KCNK9Q9NPC2 374 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 PRSS50Q9UI38 385 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 LAMP3Q9UQV4 416 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 WDR45Q9Y484 360 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 RNF115Q9Y4L5 304 aa20.05■□□□□ 0.8
ACTN1-220ENST00000556433 CLOCKO15516 846 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 CYTIPO60759 359 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 CD3EP07766 207 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 GUSBP08236 651 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 BGNP21810 368 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 PGM1P36871 562 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 OR3A2P47893 321 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 STX3Q13277 289 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 SPANXN4Q5MJ08 99 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 NCMAPQ5T1S8 102 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 SAXO2Q658L1 398 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 TYW3Q6IPR3 259 aaKnown RBP20.04■□□□□ 0.8
ACTN1-220ENST00000556433 TMPPEQ6ZT21 453 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 LILRB1Q8NHL6 650 aaPredicted RBP20.04■□□□□ 0.8
ACTN1-220ENST00000556433 TESCQ96BS2 214 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 ROPN1LQ96C74 230 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF300Q96RE9 604 aaPredicted RBP20.04■□□□□ 0.8
ACTN1-220ENST00000556433 PARD6BQ9BYG5 372 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 POLE3Q9NRF9 147 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 PNPOQ9NVS9 261 aa20.04■□□□□ 0.8
ACTN1-220ENST00000556433 ABCA2Q9BZC7 2435 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 SULT2B1O00204 365 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 ANKRD28O15084 1053 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 KIAA0513O60268 411 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 TFPIP10646 304 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 CHI3L1P36222 383 aaPredicted RBP20.03■□□□□ 0.8
ACTN1-220ENST00000556433 DIO1P49895 249 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 CLNS1AP54105 237 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms