RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 FBXO27Q8NI29 283 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 PMM1Q92871 262 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 THOC1Q96FV9 657 aaKnown RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 KLHL15Q96M94 604 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 QRSL1Q9H0R6 528 aaKnown RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 PIGMQ9H3S5 423 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 RAD21L1Q9H4I0 556 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 ZNF385DQ9H6B1 395 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 TMEM185BQ9H7F4 350 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 RNF122Q9H9V4 155 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 SLC52A3Q9NQ40 469 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 EXOSC3Q9NQT5 275 aaKnown RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 THUMPD1Q9NXG2 353 aaKnown RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 CALML5Q9NZT1 146 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 KCNN3Q9UGI6 736 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 PACSIN3Q9UKS6 424 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 PCDHB14Q9Y5E9 798 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 POLQO75417 2590 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 MYO9AB2RTY4 2548 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 DSPPQ9NZW4 1301 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 A0A0G2JND7 137 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 A0A0J9YW62 118 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 AGAP5A6NIR3 686 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 GJE1A6NN92 205 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 CLIC1O00299 241 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 TNFSF11O14788 317 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 BCAS1O75363 584 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-205ENST00000556310 CYP7B1O75881 506 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 BCHEP06276 602 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 TROVE2P10155 538 aaKnown RBP eCLIP10.35□□□□□ -0.75
SLIRP-205ENST00000556310 NCF2P19878 526 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-205ENST00000556310 IL11P20809 199 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 SFTPDP35247 375 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 CRISP3P54108 245 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 KCNJ10P78508 379 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 SORDQ00796 357 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 PLAURQ03405 335 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 GNA13Q14344 377 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 MAPK11Q15759 364 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 PDSS1Q5T2R2 415 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 C3orf33Q6P1S2 294 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 HMGN2P46Q86SG4 172 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 MSRB3Q8IXL7 192 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 LILRA2Q8N149 483 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 WDR60Q8WVS4 1066 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 TMEM234Q8WY98 164 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 ZNF524Q96C55 264 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 ZG16BQ96DA0 208 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 THUMPD3Q9BV44 507 aaKnown RBP10.35□□□□□ -0.75
SLIRP-205ENST00000556310 MTHFD2LQ9H903 347 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-205ENST00000556310 MCTS1Q9ULC4 181 aaKnown RBP10.35□□□□□ -0.75
SLIRP-205ENST00000556310 CSMD1Q96PZ7 3565 aa10.35□□□□□ -0.75
SLIRP-205ENST00000556310 TRBV5-3A0A0A0MS03 114 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 A0A1W2PP18 115 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 TMEM247A6NEH6 219 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 CLDN24A6NM45 220 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 MSTNO14793 375 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 EFNA2O43921 213 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 CXCL13O43927 109 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 AQP8O94778 261 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 SYNGR4O95473 234 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 OPN1LWP04000 364 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 DBIP07108 87 aaKnown RBP10.34□□□□□ -0.75
SLIRP-205ENST00000556310 TFPTP0C1Z6 253 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 NID1P14543 1247 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 PPIBP23284 216 aaKnown RBP10.34□□□□□ -0.75
SLIRP-205ENST00000556310 SHC1P29353 583 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 SLC6A8P48029 635 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 CPA2P48052 419 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 TLE4Q04727 773 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 GUSBP1Q15486 140 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 RGNQ15493 299 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 PAGE3Q5JUK9 113 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 METTL21CQ5VZV1 264 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 HBMQ6B0K9 141 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 KIF18BQ86Y91 864 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 PEX5LQ8IYB4 626 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 CNEP1R1Q8N9A8 125 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 SLC38A5Q8WUX1 472 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 TMEM19Q96HH6 336 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 RBM24Q9BX46 236 aaKnown RBP10.34□□□□□ -0.75
SLIRP-205ENST00000556310 TMEM120AQ9BXJ8 343 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 PRRG4Q9BZD6 226 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 CCDC134Q9H6E4 229 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 COQ10BQ9H8M1 238 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 A4GALTQ9NPC4 353 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 ACER3Q9NUN7 267 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 FGFR1OP2Q9NVK5 253 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 DNAJB12Q9NXW2 375 aaKnown RBP10.34□□□□□ -0.75
SLIRP-205ENST00000556310 SLC25A37Q9NYZ2 338 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 GMEB1Q9Y692 573 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 PDZD2O15018 2839 aa10.34□□□□□ -0.75
SLIRP-205ENST00000556310 HRNRQ86YZ3 2850 aaPredicted RBP10.34□□□□□ -0.75
SLIRP-205ENST00000556310 CREBBPQ92793 2442 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 ATP8B1O43520 1251 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 SS18L1O75177 396 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 THBS1P07996 1170 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 IL7RP16871 459 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 SLC7A1P30825 629 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms