RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	CCT7	Q99832	543 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	FAM173A	Q9BQD7	235 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	DOHH	Q9BU89	302 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	DUSP26	Q9BV47	211 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	ITPA	Q9BY32	194 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	VIPAS39	Q9H9C1	493 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	FOLH1B	Q9HBA9	442 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	ATAD3A	Q9NVI7	634 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	TUBA8	Q9NY65	449 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	KLRF1	Q9NZS2	232 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	CNIH4	Q9P003	139 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	MRTO4	Q9UKD2	239 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	ACAD8	Q9UKU7	415 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	NDRG4	Q9ULP0	352 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	FAF1	Q9UNN5	650 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	PPIE	Q9UNP9	301 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	EXO1	Q9UQ84	846 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	DTX4	Q9Y2E6	619 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	CCL27	Q9Y4X3	112 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	SNX13	Q9Y5W8	968 aa		4.25	□□□□□ -1.73
ATXN3-238	ENST00000556288	ICE1	Q9Y2F5	2266 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288		A0A0G2JMM0	328 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288		A0A1B0GTH9	108 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288		A0A1W2PPB8	328 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288		A0A1W2PRS3	328 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	GXYLT2	A0PJZ3	443 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	PINLYP	A6NC86	204 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	KIR3DP1	A8MWS1	328 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	VWC2L	B2RUY7	222 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	GTPBP1	O00178	669 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	UPK1A	O00322	258 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SDHD	O14521	159 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SCAMP2	O15127	329 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	UBD	O15205	165 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	POLR3G	O15318	223 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	HDAC3	O15379	428 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SCO2	O43819	266 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ICOSLG	O75144	302 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	COQ9	O75208	318 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLC22A3	O75751	556 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	CLPS	P04118	112 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	IGKV3-11	P04433	115 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ALOX5	P09917	674 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	HPGD	P15428	266 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	MATN1	P21941	496 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	PRPH2	P23942	346 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ABCD3	P28288	659 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	PPIF	P30405	207 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	MAGEA5	P43359	124 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	PRIM2	P49643	509 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	TMED10	P49755	219 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	EMD	P50402	254 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	CDK9	P50750	372 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLC18A1	P54219	525 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	AQP5	P55064	265 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	CLDN8	P56748	225 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	STX1B	P61266	288 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	DCAF7	P61962	342 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	RPS16	P62249	146 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SRY	Q05066	204 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	STX5	Q13190	355 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	GAB1	Q13480	694 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	EBP	Q15125	230 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	DECR1	Q16698	335 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF791	Q3KP31	576 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLC9B1	Q4ZJI4	515 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	KRTCAP3	Q53RY4	240 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF628	Q5EBL2	1059 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	XKR7	Q5GH72	579 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ANXA8L1	Q5VT79	327 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	C6orf120	Q7Z4R8	191 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	PEG10	Q86TG7	708 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	GPALPP1	Q8IXQ4	340 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	CLECL1	Q8IZS7	167 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLC34A3	Q8N130	599 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF614	Q8N883	585 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	COX18	Q8N8Q8	333 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	POGLUT1	Q8NBL1	392 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR10Q1	Q8NGQ4	319 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR1J4	Q8NGS1	313 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR6Y1	Q8NGX8	325 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	RFWD2	Q8NHY2	731 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	RAB3IL1	Q8TBN0	382 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF675	Q8TD23	568 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ADAMTS15	Q8TE58	950 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR5P2	Q8WZ92	322 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	PIK3R3	Q92569	461 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	NR4A3	Q92570	626 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SPSB4	Q96A44	273 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ADIPOR1	Q96A54	375 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	MTERF3	Q96E29	417 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	RMND5B	Q96G75	393 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SCMH1	Q96GD3	660 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SGCZ	Q96LD1	299 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	MAGEB18	Q96M61	343 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	COL21A1	Q96P44	957 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR52E6	Q96RD3	313 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	NODAL	Q96S42	347 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ALG8	Q9BVK2	526 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	MEAF6	Q9HAF1	191 aa		4.24	□□□□□ -1.73

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