RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TACSTD2P09758 323 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 NPIPA8P0DM63 369 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 CD1DP15813 335 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF17P17021 662 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 GGT1P19440 569 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 APEX1P27695 318 aaKnown RBP5.99□□□□□ -1.45
ATXN3-236ENST00000556220 IL2RGP31785 369 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 HSD17B3P37058 310 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 CHN2P52757 468 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 DVL1P1P54792 670 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-236ENST00000556220 CDH15P55291 814 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 PHEXP78562 749 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 MRPS35P82673 323 aaKnown RBP5.99□□□□□ -1.45
ATXN3-236ENST00000556220 DUSP2Q05923 314 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 SPOCK1Q08629 439 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 CASP8Q14790 479 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 MORF4L2Q15014 288 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ACAP2Q15057 778 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 OR4D1Q15615 310 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 LTB4RQ15722 352 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF239Q16600 458 aaKnown RBP5.99□□□□□ -1.45
ATXN3-236ENST00000556220 TNFAIP8L3Q5GJ75 292 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 PDSS1Q5T2R2 415 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 CPTPQ5TA50 214 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 LIPJQ5W064 366 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 TRMT10BQ6PF06 316 aaKnown RBP5.99□□□□□ -1.45
ATXN3-236ENST00000556220 KLHL17Q6TDP4 642 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 UGT2A3Q6UWM9 527 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 MARCH3Q86UD3 253 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 SLC44A2Q8IWA5 706 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-236ENST00000556220 GTPBP8Q8N3Z3 284 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-236ENST00000556220 MREGQ8N565 214 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 RNF128Q8TEB7 428 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ERP27Q96DN0 273 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 MTBPQ96DY7 904 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 REXO5Q96IC2 774 aaKnown RBP5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF681Q96N22 645 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ZIM3Q96PE6 472 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 SORCS2Q96PQ0 1159 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 TRMOQ9BU70 441 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 POPDC3Q9HBV1 291 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 NINJ2Q9NZG7 142 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 FLRT3Q9NZU0 649 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ADAM29Q9UKF5 820 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 PSME2Q9UL46 239 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ABCG2Q9UNQ0 655 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 VDAC3Q9Y277 283 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 PCDHA9Q9Y5H5 950 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 PSAT1Q9Y617 370 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 ATP23Q9Y6H3 246 aa5.99□□□□□ -1.45
ATXN3-236ENST00000556220 HEATR1Q9H583 2144 aaKnown RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 A0A087WZY1 265 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 C1orf226A1L170 272 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 B2RBV5 119 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 E7ESA3 106 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 SEMA3DO95025 777 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 STAMBPO95630 424 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 S100BP04271 92 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 IGHV1-2P23083 117 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 PSMA4P25789 261 aaKnown RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 GIFP27352 417 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 PAFAH1B1P43034 410 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 OR3A2P47893 321 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 CLK3P49761 638 aaKnown RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF83P51522 516 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 GYS2P54840 703 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 ATP6V0D1P61421 351 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 C17orf67Q0P5P2 114 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 FOXL1Q12952 345 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 CSTF3Q12996 717 aaKnown RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 GLE1Q53GS7 698 aaKnown RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF628Q5EBL2 1059 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 ARL13AQ5H913 290 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 CCNYL2Q5T2Q4 361 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 FAM180BQ6P0A1 224 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 MYLK4Q86YV6 388 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 SLC16A11Q8NCK7 471 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 WDR20Q8TBZ3 569 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 FAM110BQ8TC76 370 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF675Q8TD23 568 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 TRPC4APQ8TEL6 797 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 IFT81Q8WYA0 676 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 MRPL24Q96A35 216 aaKnown RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 CNRIP1Q96F85 164 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 SERPINI1Q99574 410 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 NPAS1Q99742 590 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 ANKRA2Q9H9E1 313 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 MYNNQ9NPC7 610 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 TIGARQ9NQ88 270 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 FAM120CQ9NX05 1096 aaKnown RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 OPTCQ9UBM4 332 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 PRSS50Q9UI38 385 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 WBP11Q9Y2W2 641 aaKnown RBP5.98□□□□□ -1.45
ATXN3-236ENST00000556220 OR10H1Q9Y4A9 318 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 SPEF1Q9Y4P9 236 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 SLC25A15Q9Y619 301 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 ZNF780BQ9Y6R6 833 aa5.98□□□□□ -1.45
ATXN3-236ENST00000556220 CXorf49A8MYA2 514 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-236ENST00000556220 B4DSR2 109 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms