RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CCDC88CQ9P219 2028 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 EML5Q05BV3 1969 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 CEP192Q8TEP8 1941 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 IGHV5-10-1A0A0J9YXX1 117 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 TMEM238LA0A1B0GVL6 79 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 A0A1B0GWA3 101 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 A0A1W2PPW3 197 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 A0A1W2PQM1 296 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 CPED1A4D0V7 1026 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 OR2W5A6NFC9 320 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 UNC119BA6NIH7 251 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 A8MU76 341 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 KDM4EB2RXH2 506 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 PRODHO43272 600 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 TLX2O43763 284 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 PTP4A3O75365 173 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 RCBTB2O95199 551 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 CER1O95813 267 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 BCL10O95999 233 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 LCKP06239 509 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 HBQ1P09105 142 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 GKN3PP0CG01 181 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 DBTP11182 482 aaKnown RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 MYF5P13349 255 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 ENDOUP21128 410 aaKnown RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 TBXA2RP21731 343 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 PSMB9P28065 219 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 CSTF2P33240 577 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 UGT2B10P36537 528 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 TGFBR2P37173 567 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 DUSP3P51452 185 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 PGDP52209 483 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 NUDT6P53370 316 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 CCL7P80098 99 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 RAB40BQ12829 278 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 FOXD4Q12950 439 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 TMED1Q13445 227 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 TRA2AQ13595 282 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 NSDHLQ15738 373 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 SNAPC1Q16533 368 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 TIGD6Q17RP2 521 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 C3orf38Q5JPI3 329 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 SNAP47Q5SQN1 464 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 ARHGAP40Q5TG30 622 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 FNDC7Q5VTL7 733 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 GUSBP11Q6P575 273 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 ULK3Q6PHR2 472 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 ZC3H14Q6PJT7 736 aaKnown RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 NUP54Q7Z3B4 507 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 SLC46A3Q7Z3Q1 461 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 P2RY8Q86VZ1 359 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 GATAD2AQ86YP4 633 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 CDK20Q8IZL9 346 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 CYP4Z2PQ8N1L4 340 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 METTL27Q8N6F8 245 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 ZNF527Q8NB42 609 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 PROKR2Q8NFJ6 384 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 OR2T33Q8NG76 320 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 OR8D4Q8NGM9 314 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 OR4C3Q8NH37 302 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 DNAJA4Q8WW22 397 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 RFKQ969G6 155 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 LCORQ96JN0 433 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 ZNF582Q96NG8 517 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 DACH2Q96NX9 599 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 TSSK6Q9BXA6 273 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 KRTAP9-9Q9BYP9 154 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 KRTAP9-4Q9BYQ2 154 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 PLA2G12AQ9BZM1 189 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 SLC19A3Q9BZV2 496 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 EGLN3Q9H6Z9 239 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 GAREM1Q9H706 876 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 FGF20Q9NP95 211 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 PNO1Q9NRX1 252 aaKnown RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 SLC22A11Q9NSA0 550 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 SIDT1Q9NXL6 827 aaKnown RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 FLRT3Q9NZU0 649 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 CNIH4Q9P003 139 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 DHCR7Q9UBM7 475 aaKnown RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 PPIEQ9UNP9 301 aaKnown RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 DIMT1Q9UNQ2 313 aaKnown RBP7.62□□□□□ -1.19
ATXN3-235ENST00000556082 BAIAP2Q9UQB8 552 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 OR10H1Q9Y4A9 318 aa7.62□□□□□ -1.19
ATXN3-235ENST00000556082 THADAQ6YHU6 1953 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 NPIPA5A0A0B4J1W7 369 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 NPIPA7E9PJI5 369 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 M0R3G1 203 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 EIF1AYO14602 144 aaKnown RBP7.61□□□□□ -1.19
ATXN3-235ENST00000556082 CDC42EP2O14613 210 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 SURF4O15260 269 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 HCN1O60741 890 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 PPM1BO75688 479 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 CSTAP01040 98 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 RPLP0P05388 317 aaKnown RBP7.61□□□□□ -1.19
ATXN3-235ENST00000556082 SYPP08247 313 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 ZNF883P0CG24 379 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 NPIPA8P0DM63 369 aa7.61□□□□□ -1.19
ATXN3-235ENST00000556082 ADORA3P0DMS8 318 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms