RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 GABARAPL2P60520 117 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 RPP38P78345 283 aaKnown RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 POU6F2P78424 691 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 IGLV3-21P80748 117 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 MAT1AQ00266 395 aaKnown RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 IL5RAQ01344 420 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ACY1Q03154 408 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 MGAT2Q10469 447 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 FUT5Q11128 374 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF155Q12901 538 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 NPRL3Q12980 569 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 GANABQ14697 944 aaKnown RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 KCNAB1Q14722 419 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 DUSP5Q16690 384 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 CLPPQ16740 277 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 TMEM95Q3KNT9 176 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 EIPR1Q53HC9 387 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 FGD3Q5JSP0 725 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 C6orf141Q5SZD1 244 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 RNF220Q5VTB9 566 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 NUP210LQ5VU65 1888 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 MLIPQ5VWP3 458 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 TCTN3Q6NUS6 607 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ISLR2Q6UXK2 745 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 TTLL10Q6ZVT0 673 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 TGIF2LYQ8IUE0 185 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 CHDHQ8NE62 594 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 GPR151Q8TDV0 419 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 APOBEC4Q8WW27 367 aaKnown RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 RIT1Q92963 219 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 NAT6Q93015 286 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 CTHRC1Q96CG8 243 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 OR1F2PQ96R84 312 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 SDF2Q99470 211 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 CDADC1Q9BWV3 514 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 GABARAPL3Q9BY60 117 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 SLC38A1Q9H2H9 487 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ANKRA2Q9H9E1 313 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 CXorf21Q9HAI6 301 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 NMNAT1Q9HAN9 279 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF304Q9HCX3 659 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 SCN3BQ9NY72 215 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 KCND3Q9UK17 655 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 MKL2Q9ULH7 1088 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 MGAT4BQ9UQ53 548 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 TPRKBQ9Y3C4 175 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 MMACHCQ9Y4U1 282 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF469Q96JG9 3925 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 SPTBP11277 2137 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 MYOCOSA0A1B0GUC4 107 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 A0A1W2PRQ8 180 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 TRIM64A6NGJ6 449 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 AGAP5A6NIR3 686 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 M0R3H8 397 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 DVL2O14641 736 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 FFAR1O14842 300 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 DSCR3O14972 297 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 OR10H3O60404 316 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 FCMRO60667 390 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 PRAMEF2O60811 474 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 NKX2-2O95096 273 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 MED26O95402 600 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ADAP00813 363 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 IFNA16P05015 189 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ANKRD34CP0C6C1 535 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 CCDC159P0C7I6 412 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 CYP4B1P13584 511 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 FBLP22087 321 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ELK4P28324 431 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 CSF2RBP32927 897 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 TTKP33981 857 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 GABRA3P34903 492 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 POLR2IP36954 125 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 PIGAP37287 484 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 CLK3P49761 638 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 PDX1P52945 283 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 UGT2B15P54855 530 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 MLLT10P55197 1068 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 RGS8P57771 180 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 TAS2R41P59536 307 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 CXCR4P61073 352 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ISL1P61371 349 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 BTG2P78543 158 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 CD47Q08722 323 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ST3GAL3Q11203 375 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 DUSP8Q13202 625 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 SRSF6Q13247 344 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 RAPSNQ13702 412 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 DGCR6Q14129 220 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ERV3-1Q14264 604 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF267Q14586 743 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 EXOSC7Q15024 291 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 TRAM2Q15035 370 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 GPR68Q15743 365 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 MEP1AQ16819 746 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ZSWIM7Q19AV6 140 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 DCST2Q5T1A1 773 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 MFSD4BQ5TF39 518 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 TYW3Q6IPR3 259 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 FRRS1Q6ZNA5 592 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms