RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PGCP20142 388 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 RYKP34925 604 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 MAGEA8P43361 318 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 ATP4BP51164 291 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 CARD18P57730 90 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 DSTNP60981 165 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 ZNF239Q16600 458 aaKnown RBP18.35■□□□□ 0.53
VTI1B-205ENST00000555543 ZNF474Q6S9Z5 364 aaPredicted RBP18.35■□□□□ 0.53
VTI1B-205ENST00000555543 FAM214BQ7L5A3 538 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 STON2Q8WXE9 905 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 ST8SIA1Q92185 356 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 SPDL1Q96EA4 605 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 NPHS2Q9NP85 383 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 EXOSC3Q9NQT5 275 aaKnown RBP18.35■□□□□ 0.53
VTI1B-205ENST00000555543 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.35■□□□□ 0.53
VTI1B-205ENST00000555543 ACER3Q9NUN7 267 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 DNAJB12Q9NXW2 375 aaKnown RBP18.35■□□□□ 0.53
VTI1B-205ENST00000555543 SLC25A37Q9NYZ2 338 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 SLAMF8Q9P0V8 285 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 P2RX2Q9UBL9 471 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 DCTN4Q9UJW0 460 aa18.35■□□□□ 0.53
VTI1B-205ENST00000555543 SPG11Q96JI7 2443 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 A0A096LPI6 279 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 A0A1W2PNR3 127 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 TUBAL3A6NHL2 446 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 CTAG2O75638 210 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 BCHEP06276 602 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 NUDT7P0C024 238 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 TFPTP0C1Z6 253 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 SQLEQ14534 574 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 AGKQ53H12 422 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 RPS26P11Q5JNZ5 115 aaPredicted RBP18.34■□□□□ 0.53
VTI1B-205ENST00000555543 PAGE3Q5JUK9 113 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 PDSS1Q5T2R2 415 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 PLEKHM3Q6ZWE6 761 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 FAM222BQ8WU58 562 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 SLC38A5Q8WUX1 472 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 WDR60Q8WVS4 1066 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 ROBO4Q8WZ75 1007 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 ZNF385DQ9H6B1 395 aa18.34■□□□□ 0.53
VTI1B-205ENST00000555543 MTHFD2LQ9H903 347 aaPredicted RBP18.34■□□□□ 0.53
VTI1B-205ENST00000555543 CLIC1O00299 241 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 AP3D1O14617 1153 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 SS18L1O75177 396 aaPredicted RBP18.33■□□□□ 0.52
VTI1B-205ENST00000555543 CD8BP10966 210 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 CCKARP32238 428 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 FAM27E3Q08E93 113 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 MERTKQ12866 999 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 RGNQ15493 299 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 LRIF1Q5T3J3 769 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 C3orf33Q6P1S2 294 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 ARFGAP2Q8N6H7 521 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 RNF128Q8TEB7 428 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 TMEM19Q96HH6 336 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 GMPPAQ96IJ6 420 aaPredicted RBP18.33■□□□□ 0.52
VTI1B-205ENST00000555543 GPATCH1Q9BRR8 931 aaKnown RBP18.33■□□□□ 0.52
VTI1B-205ENST00000555543 CCDC106Q9BWC9 280 aa18.33■□□□□ 0.52
VTI1B-205ENST00000555543 FAM221AA4D161 298 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 GJE1A6NN92 205 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 A6NNC1 897 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 PLGP00747 810 aaPredicted RBP18.32■□□□□ 0.52
VTI1B-205ENST00000555543 SLC7A1P30825 629 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 MRPL2Q5T653 305 aaKnown RBP18.32■□□□□ 0.52
VTI1B-205ENST00000555543 VRK2Q86Y07 508 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 CMIPQ8IY22 773 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 C10orf111Q8N326 155 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 ZNF610Q8N9Z0 462 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 ZNF563Q8TA94 476 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 ABHD3Q8WU67 409 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 TMEM234Q8WY98 164 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 NRGNQ92686 78 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 CPNE4Q96A23 557 aaPredicted RBP18.32■□□□□ 0.52
VTI1B-205ENST00000555543 CTPS2Q9NRF8 586 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 RLIMQ9NVW2 624 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 VAPAQ9P0L0 249 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 PROCRQ9UNN8 238 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 EMC9Q9Y3B6 208 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 MPDZO75970 2070 aa18.32■□□□□ 0.52
VTI1B-205ENST00000555543 TRBV5-3A0A0A0MS03 114 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 A0A0G2JND7 137 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 DBIP07108 87 aaKnown RBP18.31■□□□□ 0.52
VTI1B-205ENST00000555543 EPXP11678 715 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 BMP2P12643 396 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 IL7RP16871 459 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 NCF2P19878 526 aaPredicted RBP18.31■□□□□ 0.52
VTI1B-205ENST00000555543 KLK2P20151 261 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 CRISP3P54108 245 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 ZNF836Q6ZNA1 936 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 CDH24Q86UP0 819 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 PEX5LQ8IYB4 626 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 OR6K3Q8NGY3 331 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 PMM1Q92871 262 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 MAL2Q969L2 176 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 OR5B2Q96R09 309 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 RASSF1Q9NS23 344 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 TMEM45AQ9NWC5 275 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 CALML5Q9NZT1 146 aa18.31■□□□□ 0.52
VTI1B-205ENST00000555543 CELSR1Q9NYQ6 3014 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 IGHV3-15A0A0B4J1V0 119 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 ENPP1P22413 925 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms