RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PEX5LQ8IYB4 626 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 ZZZ3Q8IYH5 903 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 LILRA2Q8N149 483 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 MEIOBQ8N635 442 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 METTL25Q8N6Q8 603 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 LILRB4Q8NHJ6 448 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 FNDC9Q8TBE3 224 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 CA5BP1Q8WTZ4 195 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
SYNE2-214ENST00000554928 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
SYNE2-214ENST00000554928 LRRC58Q96CX6 371 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 DTNBP1Q96EV8 351 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 DNAJA3Q96EY1 480 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 SRXN1Q9BYN0 137 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 TMEM38AQ9H6F2 299 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 KAT8Q9H7Z6 458 aaKnown RBP11.1□□□□□ -0.63
SYNE2-214ENST00000554928 COQ10BQ9H8M1 238 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 NANOGQ9H9S0 305 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 CALHM2Q9HA72 323 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 COQ3Q9NZJ6 369 aa11.1□□□□□ -0.63
SYNE2-214ENST00000554928 A0A1W2PNR3 127 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 CDHR4A6H8M9 788 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 EVPLLA8MZ36 301 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 PABPC4LP0CB38 370 aaKnown RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 PPIBP23284 216 aaKnown RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 TIMP3P35625 211 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 ACAA2P42765 397 aaKnown RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 EIF1AXP47813 144 aaKnown RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 IDH2P48735 452 aaKnown RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 RAC1P63000 192 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 EPS8Q12929 822 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 SNTB1Q13884 538 aaKnown RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 PON3Q15166 354 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 TMEM176BQ3YBM2 270 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 LIN52Q52LA3 116 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 SP5Q6BEB4 398 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 PLEKHM3Q6ZWE6 761 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 NET1Q7Z628 596 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 SERPINA11Q86U17 422 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 GRAMD2AQ8IUY3 354 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 OR10A6Q8NH74 314 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 OR10D3Q8NH80 312 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 OR2V1Q8NHB1 315 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 BBS10Q8TAM1 723 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 ASB5Q8WWX0 329 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 OIT3Q8WWZ8 545 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 MRGPRX4Q96LA9 322 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 UCN2Q96RP3 112 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 EXOSC3Q9NQT5 275 aaKnown RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 CTPS2Q9NRF8 586 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 ACER3Q9NUN7 267 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 THUMPD1Q9NXG2 353 aaKnown RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 CALML5Q9NZT1 146 aa11.09□□□□□ -0.63
SYNE2-214ENST00000554928 GPC6Q9Y625 555 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-214ENST00000554928 ADGRG4Q8IZF6 3080 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 SLC22A20A6NK97 555 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 ADAMDEC1O15204 470 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 IL2RAP01589 272 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 OPN1SWP03999 348 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 THBS1P07996 1170 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 TMIGD3P0DMS9 266 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-214ENST00000554928 COX4I1P13073 169 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 PGCP20142 388 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 CCNA2P20248 432 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 BMP5P22003 454 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 ELK4P28324 431 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 EIF1P41567 113 aaKnown RBP11.08□□□□□ -0.64
SYNE2-214ENST00000554928 CRYBA2P53672 197 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 DLX5P56178 289 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 DMTNQ08495 405 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 MERTKQ12866 999 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 CYLC2Q14093 348 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-214ENST00000554928 CYP51A1Q16850 503 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 MMEL1Q495T6 779 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 COQ5Q5HYK3 327 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 ZNF311Q5JNZ3 666 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 RNF220Q5VTB9 566 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 REEP3Q6NUK4 255 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 PPP4R4Q6NUP7 873 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 PIGWQ7Z7B1 504 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 CPLX4Q7Z7G2 160 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 CALHM3Q86XJ0 350 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 CMIPQ8IY22 773 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 ZNF563Q8TA94 476 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 ROBO4Q8WZ75 1007 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 ST8SIA1Q92185 356 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 WNT2BQ93097 391 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 KLHL15Q96M94 604 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 SPATA9Q9BWV2 254 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 OR11A1Q9GZK7 315 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 HHATLQ9HCP6 504 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 CLEC4AQ9UMR7 237 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 KLF2Q9Y5W3 355 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-214ENST00000554928 ARHGAP21Q5T5U3 1957 aa11.08□□□□□ -0.64
SYNE2-214ENST00000554928 IGHV3-15A0A0B4J1V0 119 aa11.07□□□□□ -0.64
SYNE2-214ENST00000554928 TMEM247A6NEH6 219 aa11.07□□□□□ -0.64
SYNE2-214ENST00000554928 CFAP73A6NFT4 308 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms