RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TOMM34Q15785 309 aaPredicted RBP14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 NPTX1Q15818 432 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 FAM98BQ52LJ0 330 aaKnown RBP14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 NHSL2Q5HYW2 709 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 RAET1LQ5VY80 246 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 ZNF613Q6PF04 617 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 ENPP6Q6UWR7 440 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 TRILQ7L0X0 811 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 YRDCQ86U90 279 aaKnown RBP14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 GHDCQ8N2G8 530 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 FAM86B1Q8N7N1 296 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 OR4D11Q8NGI4 311 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 OR10Q1Q8NGQ4 319 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 PHF10Q8WUB8 498 aaKnown RBP14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 C7orf34Q96L11 122 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 BBC3Q96PG8 261 aaPredicted RBP14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 KLHDC3Q9BQ90 382 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 WFDC6Q9BQY6 131 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 ADAM19Q9H013 955 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 DEFB127Q9H1M4 99 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 IL1RAPQ9NPH3 570 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 ASF1BQ9NVP2 202 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 RPS6KB2Q9UBS0 482 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 NPIPA1Q9UND3 350 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 HEATR5AQ86XA9 2040 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 FAM208BQ5VWN6 2430 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 OR2M5A3KFT3 312 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 AQP7O14520 342 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 TPST2O60704 377 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 PSMA4P25789 261 aaKnown RBP14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 MST1P26927 711 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 OR1E2P47887 323 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 TDGF1P3P51864 188 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 GFRA1P56159 465 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 B3GALT5-AS1P59052 145 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 FOXF1Q12946 379 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.88□□□□□ -0.034e-6■□□□□ 10.9
SPTLC2-203ENST00000554901 WIPI1Q5MNZ9 446 aaPredicted RBP14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 ARHGAP11AQ6P4F7 1023 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 ULK3Q6PHR2 472 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 SPATA24Q86W54 205 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 LACC1Q8IV20 430 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 C10orf67Q8IYJ2 551 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 SLC47A1Q96FL8 570 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 SFXN2Q96NB2 322 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 AMBRA1Q9C0C7 1298 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 LDAHQ9H6V9 325 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 SERINC1Q9NRX5 453 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 ENPP4Q9Y6X5 453 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 KALRNO60229 2985 aa14.88□□□□□ -0.03
SPTLC2-203ENST00000554901 DHRS12A0PJE2 317 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 OR14I1A6ND48 311 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 ERICH4A6NGS2 130 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 OR5F1O95221 314 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 THRBP10828 461 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 TNFRSF1BP20333 461 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 HTR2AP28223 471 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 POLR2HP52434 150 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 HOXC5Q00444 222 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 CHRNB3Q05901 458 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 OR1Q1Q15612 314 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 BCL2A1Q16548 175 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 ENTPD8Q5MY95 495 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 PLEKHM3Q6ZWE6 761 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 PIWIL3Q7Z3Z3 882 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 CYP4Z1Q86W10 505 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 RBM45Q8IUH3 476 aaKnown RBP14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 CADM2Q8N3J6 435 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 POC1BQ8TC44 478 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 CPT1CQ8TCG5 803 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 ADAMTS16Q8TE57 1224 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 SLC25A43Q8WUT9 341 aaPredicted RBP14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 PRRC1Q96M27 445 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 SLC6A15Q9H2J7 730 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 SELENONQ9NZV5 590 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 RPH3AQ9Y2J0 694 aaPredicted RBP14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 SPIN1Q9Y657 262 aaPredicted RBP14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 AP4B1Q9Y6B7 739 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 BSNQ9UPA5 3926 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 A0A0B4J2E0 115 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 A0A1B0GWA3 101 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 A0A1B0GX12 115 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 TRAPPC13A5PLN9 417 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 FABP3P05413 133 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 RAP2AP10114 183 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 PNMTP11086 282 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 EDN3P14138 238 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 RHCEP18577 417 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 MAGEA2P43356 314 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 ACTR3P61158 418 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 MERTKQ12866 999 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 SELENBP1Q13228 472 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 VASNQ6EMK4 673 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 DEF8Q6ZN54 512 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 ADGRG5Q8IZF4 528 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 C3orf49Q96BT1 292 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 ZNF524Q96C55 264 aa14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 ZNF300Q96RE9 604 aaPredicted RBP14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 TSPAN10Q9H1Z9 355 aaPredicted RBP14.87□□□□□ -0.03
SPTLC2-203ENST00000554901 EXO5Q9H790 373 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms