RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 C6orf120Q7Z4R8 191 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 RPRMLQ8N4K4 120 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 OR1J4Q8NGS1 313 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 TAMM41Q96BW9 452 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 MOAP1Q96BY2 351 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 TPD52L3Q96J77 140 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 AMDHD1Q96NU7 426 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 GNRHR2Q96P88 292 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 ZNF347Q96SE7 839 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 MBOAT4Q96T53 435 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 EPYCQ99645 322 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 TOR3AQ9H497 397 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 GLIPR2Q9H4G4 154 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 REEP1Q9H902 201 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 ANKRA2Q9H9E1 313 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 FAM118AQ9NWS6 357 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 KLRF1Q9NZS2 232 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 SPRR3Q9UBC9 169 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 TMEFF2Q9UIK5 374 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-214ENST00000554604 RNF6Q9Y252 685 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 GPR55Q9Y2T6 319 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-214ENST00000554604 ORC6Q9Y5N6 252 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 SNX8Q9Y5X2 465 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 DOCK7Q96N67 2140 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 ANKRD17O75179 2603 aaKnown RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 A0A087WXM4 84 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 FAM90A27PA6NNH2 459 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 M0QX08 132 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 GNB5O14775 395 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 SLC16A6O15403 523 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 PLOD3O60568 738 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ABCB7O75027 752 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 COQ9O75208 318 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 UGT2B11O75310 529 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 PRF1P14222 555 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 GABRA1P14867 456 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ITGA2P17301 1181 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ENDOUP21128 410 aaKnown RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ELAVL4P26378 380 aaKnown RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 IL12BP29460 328 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 SOX18P35713 384 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ALDH3B2P48448 385 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 CCT3P49368 545 aaKnown RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ANXA11P50995 505 aaKnown RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ZNF155Q12901 538 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 HSPB3Q12988 150 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 SNTA1Q13424 505 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 CEBPEQ15744 281 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ZIK1Q3SY52 487 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 SPDYE7PQ495Y7 208 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 C1orf185Q5T7R7 199 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 TIGD3Q6B0B8 471 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 REEP3Q6NUK4 255 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 SLC30A6Q6NXT4 461 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ARMC8Q8IUR7 673 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 HS3ST5Q8IZT8 346 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ZNF786Q8N393 782 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 OR7G2Q8NG99 324 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 LILRB4Q8NHJ6 448 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 ADAMTS16Q8TE57 1224 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 TMCO6Q96DC7 493 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 TMEM41AQ96HV5 264 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 SLC35G5Q96KT7 338 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 COL21A1Q96P44 957 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 TTYH2Q9BSA4 534 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 FOLH1BQ9HBA9 442 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 KCNJ16Q9NPI9 418 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 SAMHD1Q9Y3Z3 626 aaKnown RBP11.31□□□□□ -0.6
SHMT2-214ENST00000554604 OR10H1Q9Y4A9 318 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 PCDHGB3Q9Y5G1 929 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 POLQO75417 2590 aa11.31□□□□□ -0.6
SHMT2-214ENST00000554604 PCNX3Q9H6A9 2034 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 PRAMEF25A6NGN4 478 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 OR6C70A6NIJ9 312 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 FAM47E-STBD1D6RA91 191 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 C19orf84I3L1E1 186 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 TO15178 435 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 ADAMDEC1O15204 470 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 ICOSLGO75144 302 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 SLITRK5O94991 958 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 TFPTP0C1Z6 253 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 CT45A8P0DMV1 189 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 CT45A9P0DMV2 189 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 ATP6V1B1P15313 513 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 CDH2P19022 906 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-214ENST00000554604 AQP1P29972 269 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 MC3RP41968 323 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 CASP9P55211 416 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 PSPHP78330 225 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 CT45A2Q5DJT8 189 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 FNDC7Q5VTL7 733 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 KDM4DQ6B0I6 523 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 DESI1Q6ICB0 168 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 FAHD1Q6P587 224 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 TMEM81Q6P7N7 255 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 BHLHB9Q6PI77 547 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 TMEM107Q6UX40 140 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 THAP5Q7Z6K1 395 aa11.3□□□□□ -0.6
SHMT2-214ENST00000554604 SATL1Q86VE3 508 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms