RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 GKN1Q9NS71 199 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 EMC3Q9P0I2 261 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 GALPQ9UBC7 116 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 IL36RNQ9UBH0 155 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 RAB23Q9ULC3 237 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 WBP11Q9Y2W2 641 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 FIS1Q9Y3D6 152 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 YIPF1Q9Y548 306 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 PTGDR2Q9Y5Y4 395 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 HELZP42694 1942 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 PLXNB3Q9ULL4 1909 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 GON4LQ3T8J9 2241 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 A0A0U1RQS6 177 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TCRBV3S1A0A5B6 114 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 C5orf52A6NGY3 159 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 INAFM1C9JVW0 142 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 PRR23D1E9PI22 279 aaPredicted RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 CDC7O00311 574 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 MRASO14807 208 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 UBDO15205 165 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 INSIG1O15503 277 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 OGG1O15527 345 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 KCNJ13O60928 360 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 DNAJB6O75190 326 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 SMIM24O75264 130 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 GPC4O75487 556 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 CLDN11O75508 207 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 SUPT7LO94864 414 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TSPAN12O95859 305 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 LGI1O95970 557 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 IGHEP01854 428 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 OPN1LWP04000 364 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RETP07949 1114 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RPS17P08708 135 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ZCCHC18P0CG32 403 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 PRR23D2P0DMB1 279 aaPredicted RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ZNF24P17028 368 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 FUT1P19526 365 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ACADLP28330 430 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ATP5C1P36542 298 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RPL3P39023 403 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 EIF2S3P41091 472 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 HTR2BP41595 481 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 HAAOP46952 286 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ZFP36L2P47974 494 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RFX2P48378 723 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 MRPL19P49406 292 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TUFMP49411 452 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ACADVLP49748 655 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 CCNHP51946 323 aaPredicted RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 NUDT6P53370 316 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 IRX1P78414 480 aaPredicted RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 MRPS22P82650 360 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ROR2Q01974 943 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 FOLH1Q04609 750 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ACSM1Q08AH1 577 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TRAP1Q12931 704 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TRAF2Q12933 501 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 PPP1R8Q12972 351 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 STX5Q13190 355 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ART3Q13508 389 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 FLOT2Q14254 428 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 GRB7Q14451 532 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 PON2Q15165 354 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 SHBQ15464 509 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 MAPRE2Q15555 327 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TRIP10Q15642 601 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 LRRC36Q1X8D7 754 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 CTSL3PQ5NE16 218 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ZFP1Q6P2D0 407 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 UGT2A3Q6UWM9 527 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ITIH5Q86UX2 942 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ADIPOR2Q86V24 386 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RALGPS2Q86X27 583 aaPredicted RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ZDHHC21Q8IVQ6 265 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 PIANPQ8IYJ0 282 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 SPEM1Q8N4L4 309 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 MARVELD2Q8N4S9 558 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 PCDH20Q8N6Y1 951 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RNF148Q8N7C7 305 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 SNX31Q8N9S9 440 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TMEM185AQ8NFB2 350 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 OR4K2Q8NGD2 314 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 OR9I1Q8NGQ6 314 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 OR2T3Q8NH03 318 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 OCC1Q8TAD7 63 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RNASE8Q8TDE3 154 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RLN3Q8WXF3 142 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 ISG20Q96AZ6 181 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 SLCO4A1Q96BD0 722 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 SGK3Q96BR1 496 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TMA16Q96EY4 203 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 RRNAD1Q96FB5 475 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 DCUN1D1Q96GG9 259 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TXNDC15Q96J42 360 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 HARBI1Q96MB7 349 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 CYP2S1Q96SQ9 504 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 GPA33Q99795 319 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 C1QTNF7Q9BXJ2 289 aa4.76□□□□□ -1.65
MTHFD1-206ENST00000554353 TDRD1Q9BXT4 1180 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms