RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 HNRNPRO43390 633 aaKnown RBP12.4□□□□□ -0.43
NUMB-209ENST00000554315 NTN1O95631 604 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 NUDT7P0C024 238 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 CD1EP15812 388 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 SLC7A1P30825 629 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 PEX19P40855 299 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 COPZ1P61923 177 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 GNGT1P63211 74 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 MERTKQ12866 999 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 FOXF1Q12946 379 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 SELENBP1Q13228 472 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 SCARB2Q14108 478 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 TMEM176BQ3YBM2 270 aaPredicted RBP12.4□□□□□ -0.43
NUMB-209ENST00000554315 MRPL2Q5T653 305 aaKnown RBP12.4□□□□□ -0.43
NUMB-209ENST00000554315 RNF220Q5VTB9 566 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 HBMQ6B0K9 141 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 GRINAQ7Z429 371 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 GGNQ86UU5 652 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 C9orf106Q8NAJ2 232 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 HIPK4Q8NE63 616 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 SLC25A43Q8WUT9 341 aaPredicted RBP12.4□□□□□ -0.43
NUMB-209ENST00000554315 MAL2Q969L2 176 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 SLC35B4Q969S0 331 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 LRRC58Q96CX6 371 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 ECSITQ9BQ95 431 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 CPPED1Q9BRF8 314 aaPredicted RBP12.4□□□□□ -0.43
NUMB-209ENST00000554315 SFXN3Q9BWM7 321 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 UCK2Q9BZX2 261 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 ASH1LQ9NR48 2969 aaKnown RBP12.4□□□□□ -0.43
NUMB-209ENST00000554315 FOXD3Q9UJU5 478 aaPredicted RBP12.4□□□□□ -0.43
NUMB-209ENST00000554315 ZNF443Q9Y2A4 671 aaPredicted RBP12.4□□□□□ -0.43
NUMB-209ENST00000554315 AP3M1Q9Y2T2 418 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 CLDN24A6NM45 220 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 FAM90A27PA6NNH2 459 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 MRASO14807 208 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 BMP5P22003 454 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 IDH2P48735 452 aaKnown RBP12.39□□□□□ -0.43
NUMB-209ENST00000554315 CLK1P49759 484 aaKnown RBP12.39□□□□□ -0.43
NUMB-209ENST00000554315 DLX5P56178 289 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 CYP51A1Q16850 503 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 NANOGP8Q6NSW7 305 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 C3orf33Q6P1S2 294 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 HMGN2P46Q86SG4 172 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 MTDHQ86UE4 582 aaKnown RBP12.39□□□□□ -0.43
NUMB-209ENST00000554315 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 VRK2Q86Y07 508 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 OR10D3Q8NH80 312 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 NFKBIDQ8NI38 313 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 INTS12Q96CB8 462 aaKnown RBP12.39□□□□□ -0.43
NUMB-209ENST00000554315 SPOCK3Q9BQ16 436 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 PIGMQ9H3S5 423 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 KAT8Q9H7Z6 458 aaKnown RBP12.39□□□□□ -0.43
NUMB-209ENST00000554315 EVA1AQ9H8M9 152 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 GLRX2Q9NS18 164 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
NUMB-209ENST00000554315 SLC13A4Q9UKG4 626 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 ANGPT4Q9Y264 503 aa12.39□□□□□ -0.43
NUMB-209ENST00000554315 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
NUMB-209ENST00000554315 NCOA6Q14686 2063 aaPredicted RBP12.39□□□□□ -0.43
NUMB-209ENST00000554315 A0A0J9YW62 118 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 H0YC42 278 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 SYT5O00445 386 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 FBP2O00757 339 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 TNFSF11O14788 317 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 SNX3O60493 162 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 TGM6O95932 706 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 OPN1LWP04000 364 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 COX6B1P14854 86 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 DRD4P21917 467 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 PRKAR1BP31321 381 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 SFTPDP35247 375 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 SLC1A3P43003 542 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 ZNF136P52737 540 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 TPD52P55327 224 aaPredicted RBP12.38□□□□□ -0.43
NUMB-209ENST00000554315 PON3Q15166 354 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 CDSNQ15517 529 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 INTS11Q5TA45 600 aaKnown RBP12.38□□□□□ -0.43
NUMB-209ENST00000554315 PLEKHM3Q6ZWE6 761 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 LIX1LQ8IVB5 337 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 ATP6V1C2Q8NEY4 427 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 OR8J3Q8NGG0 315 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 CPNE4Q96A23 557 aaPredicted RBP12.38□□□□□ -0.43
NUMB-209ENST00000554315 CMTM5Q96DZ9 223 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 KLHDC3Q9BQ90 382 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 TMEM185BQ9H7F4 350 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 EFCAB1Q9HAE3 211 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 KLHL28Q9NXS3 571 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 PCNX3Q9H6A9 2034 aa12.38□□□□□ -0.43
NUMB-209ENST00000554315 EFNA2O43921 213 aa12.37□□□□□ -0.43
NUMB-209ENST00000554315 CXCL13O43927 109 aa12.37□□□□□ -0.43
NUMB-209ENST00000554315 COL8A1P27658 744 aa12.37□□□□□ -0.43
NUMB-209ENST00000554315 MTPNP58546 118 aa12.37□□□□□ -0.43
NUMB-209ENST00000554315 RAC3P60763 192 aa12.37□□□□□ -0.43
NUMB-209ENST00000554315 EPS8Q12929 822 aa12.37□□□□□ -0.43
NUMB-209ENST00000554315 RPS26P11Q5JNZ5 115 aaPredicted RBP12.37□□□□□ -0.43
NUMB-209ENST00000554315 REP15Q6BDI9 236 aa12.37□□□□□ -0.43
NUMB-209ENST00000554315 PPP4R4Q6NUP7 873 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms