RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 FUT5Q11128 374 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 FOXF1Q12946 379 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 MYBPHQ13203 477 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 FGFBP1Q14512 234 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 PON3Q15166 354 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 RCN1Q15293 331 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 TIGD2Q4W5G0 525 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 AGKQ53H12 422 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 AP1ARQ63HQ0 302 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 TYW3Q6IPR3 259 aaKnown RBP11.75□□□□□ -0.53
SHMT2-211ENST00000554310 PLXDC2Q6UX71 529 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 HACD2Q6Y1H2 254 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 DNAJC14Q6Y2X3 702 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-211ENST00000554310 ZNF621Q6ZSS3 439 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 ESPNLQ6ZVH7 1005 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 KIF18BQ86Y91 864 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 ZNF619Q8N2I2 560 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 TMCO5AQ8N6Q1 288 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 OR9I1Q8NGQ6 314 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 OR5W2Q8NH69 310 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 POC1BQ8TC44 478 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 XAGE5Q8WWM1 108 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 ARSGQ96EG1 525 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 ITCHQ96J02 903 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 LURAP1Q96LR2 239 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 ZNF559Q9BR84 538 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 RNF122Q9H9V4 155 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 TMEM45AQ9NWC5 275 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 PACSIN3Q9UKS6 424 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 MKLN1Q9UL63 735 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 LIPT1Q9Y234 373 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 HEATR5AQ86XA9 2040 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 PDZD2O15018 2839 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 CENPVL1A0A0U1RR11 272 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 A0A1W2PNV4 684 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 FAM234BA2RU67 622 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 GJE1A6NN92 205 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 BBIP1A8MTZ0 92 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 ADAMDEC1O15204 470 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 CSTAP01040 98 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 GSNP06396 782 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 ZCCHC18P0CG32 403 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 PRKCAP17252 672 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 KIR2DL3P43628 341 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 EIF1AXP47813 144 aaKnown RBP11.74□□□□□ -0.53
SHMT2-211ENST00000554310 CCR4P51679 360 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 AGFG1P52594 562 aaKnown RBP11.74□□□□□ -0.53
SHMT2-211ENST00000554310 SLC34A1Q06495 639 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 SKP2Q13309 424 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 CBFBQ13951 182 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 SGCBQ16585 318 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 CTU2Q2VPK5 515 aaKnown RBP11.74□□□□□ -0.53
SHMT2-211ENST00000554310 NDUFAF6Q330K2 333 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 GPAT3Q53EU6 434 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 FRRS1Q6ZNA5 592 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 EIF3MQ7L2H7 374 aaKnown RBP11.74□□□□□ -0.53
SHMT2-211ENST00000554310 OR10D3Q8NH80 312 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 OR2V1Q8NHB1 315 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 FNDC9Q8TBE3 224 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 GPR119Q8TDV5 335 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 TSPEARQ8WU66 669 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 FIG4Q92562 907 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 ZNF845Q96IR2 970 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-211ENST00000554310 ADGRG7Q96K78 797 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 MRGPRX4Q96LA9 322 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 KLHL15Q96M94 604 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 TRNT1Q96Q11 434 aaKnown RBP11.74□□□□□ -0.53
SHMT2-211ENST00000554310 NPAS1Q99742 590 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 KLHDC3Q9BQ90 382 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 SAP130Q9H0E3 1048 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 POMPQ9Y244 141 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 SLC35A3Q9Y2D2 325 aa11.74□□□□□ -0.53
SHMT2-211ENST00000554310 ETV2O00321 342 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-211ENST00000554310 DNAJA2O60884 412 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 PDE5AO76074 875 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 H6PDO95479 791 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 CAPN3P20807 821 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 SELENBP1Q13228 472 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 SLC25A53Q5H9E4 307 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 C6orf10Q5SRN2 563 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 PDSS1Q5T2R2 415 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 REP15Q6BDI9 236 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 OLIG3Q7RTU3 272 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 LILRA2Q8N149 483 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 FAM71CQ8NEG0 241 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 PNPT1Q8TCS8 783 aaKnown RBP11.73□□□□□ -0.53
SHMT2-211ENST00000554310 ZFP90Q8TF47 636 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 ST8SIA1Q92185 356 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 PMM1Q92871 262 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 LAT2Q9GZY6 243 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 TMEM185BQ9H7F4 350 aa11.73□□□□□ -0.53
SHMT2-211ENST00000554310 MCTS1Q9ULC4 181 aaKnown RBP11.73□□□□□ -0.53
SHMT2-211ENST00000554310 PRAMEF27A3QJZ7 478 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 FBP2O00757 339 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 MSTNO14793 375 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 NTN1O95631 604 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 C1QCP02747 245 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 UBTFL6P0CB48 400 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-211ENST00000554310 VHLP40337 213 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms