RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 STX11O75558 287 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 CD79BP40259 229 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 CRATP43155 626 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 CLK3P49761 638 aaKnown RBP6.95□□□□□ -1.3
ABCD4-220ENST00000553998 GFRA1P56159 465 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 FBXW4P57775 412 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 DSTNP60981 165 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 HPCAP84074 193 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 RBBP4Q09028 425 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 ARHGAP11BQ3KRB8 267 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.95□□□□□ -1.3
ABCD4-220ENST00000553998 PRAMEF8Q5VWM4 474 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 PRAMEF7Q5VXH5 474 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 BICRALQ6AI39 1079 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 SLC30A6Q6NXT4 461 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 ZNF474Q6S9Z5 364 aaPredicted RBP6.95□□□□□ -1.3
ABCD4-220ENST00000553998 LRRC74BQ6ZQY2 392 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 C22orf34Q6ZV56 151 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 C16orf62Q7Z3J2 963 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 FITM2Q8N6M3 262 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 POU5F2Q8N7G0 328 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 FAM83FQ8NEG4 500 aaPredicted RBP6.95□□□□□ -1.3
ABCD4-220ENST00000553998 OR5D16Q8NGK9 328 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 FBXO30Q8TB52 745 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 RNF138Q8WVD3 245 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 XAGE5Q8WWM1 108 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 CDS1Q92903 461 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 INTS12Q96CB8 462 aaKnown RBP6.95□□□□□ -1.3
ABCD4-220ENST00000553998 LRRC58Q96CX6 371 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 RCN3Q96D15 328 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 PIK3IP1Q96FE7 263 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 AURKBQ96GD4 344 aaPredicted RBP6.95□□□□□ -1.3
ABCD4-220ENST00000553998 HS3ST6Q96QI5 342 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 SDF2Q99470 211 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 HOPXQ9BPY8 73 aaPredicted RBP6.95□□□□□ -1.3
ABCD4-220ENST00000553998 CPPED1Q9BRF8 314 aaPredicted RBP6.95□□□□□ -1.3
ABCD4-220ENST00000553998 SPATA9Q9BWV2 254 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 TMEM38AQ9H6F2 299 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 UBQLN4Q9NRR5 601 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 ELOVL5Q9NYP7 299 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 CALML5Q9NZT1 146 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 P2RX2Q9UBL9 471 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 KCNE3Q9Y6H6 103 aa6.95□□□□□ -1.3
ABCD4-220ENST00000553998 A0A1W2PQD3 144 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 PRAMEF25A6NGN4 478 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 ALG1L2C9J202 215 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 AIM2O14862 343 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 CD5LO43866 347 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 ICOSLGO75144 302 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 CBR3O75828 277 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 UTS2O95399 124 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 CGAP01215 116 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 IGKV1D-16P01601 117 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 THBS1P07996 1170 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 ETFAP13804 333 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 TBXA2RP21731 343 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 CALB2P22676 271 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 SLC6A2P23975 617 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 CCKARP32238 428 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 THBS2P35442 1172 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 UGT2B10P36537 528 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 LHX2P50458 406 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 CRISP3P54108 245 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 ATP12AP54707 1039 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 ETFDHQ16134 617 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 COX20Q5RI15 118 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 GCNT6Q5T4J0 391 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 CCNJQ5T5M9 372 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 NANOGP8Q6NSW7 305 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 FIGNL1Q6PIW4 674 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 ENPP6Q6UWR7 440 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 DNM1P46Q6ZS02 220 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 TRPM8Q7Z2W7 1104 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 NET1Q7Z628 596 aaPredicted RBP6.94□□□□□ -1.3
ABCD4-220ENST00000553998 SERPINA11Q86U17 422 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 MISPQ8IVT2 679 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 SLC30A8Q8IWU4 369 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 ZNF611Q8N823 705 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 ZNF527Q8NB42 609 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 PNPT1Q8TCS8 783 aaKnown RBP6.94□□□□□ -1.3
ABCD4-220ENST00000553998 TMEM171Q8WVE6 324 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 RAB8BQ92930 207 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 EFHD2Q96C19 240 aaPredicted RBP6.94□□□□□ -1.3
ABCD4-220ENST00000553998 DTNBP1Q96EV8 351 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 OTUB1Q96FW1 271 aaPredicted RBP6.94□□□□□ -1.3
ABCD4-220ENST00000553998 NODALQ96S42 347 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 TMEM204Q9BSN7 226 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 THUMPD3Q9BV44 507 aaKnown RBP6.94□□□□□ -1.3
ABCD4-220ENST00000553998 OSBPL11Q9BXB4 747 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 OR2B2Q9GZK3 357 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 SAP130Q9H0E3 1048 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 CXorf56Q9H5V9 222 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 KAT8Q9H7Z6 458 aaKnown RBP6.94□□□□□ -1.3
ABCD4-220ENST00000553998 METTL7AQ9H8H3 244 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 NANOGQ9H9S0 305 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 A4GALTQ9NPC4 353 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 SDHAF3Q9NRP4 125 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 NDE1Q9NXR1 346 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 KLHL28Q9NXS3 571 aa6.94□□□□□ -1.3
ABCD4-220ENST00000553998 MRPS18CQ9Y3D5 142 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms