RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 KCNE3Q9Y6H6 103 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 A0A087WUV0 522 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-209ENST00000553308 IGHV4-61A0A0C4DH41 118 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 EXOC1LA0A1B0GW35 172 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 ESPNB1AK53 854 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 H3BNH8 94 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 GTPBP1O00178 669 aaKnown RBP7.97□□□□□ -1.13
SYNE2-209ENST00000553308 KIAA0513O60268 411 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 TBX19O60806 448 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 HSPA4LO95757 839 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 PGRP06401 933 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 APEHP13798 732 aaKnown RBP7.97□□□□□ -1.13
SYNE2-209ENST00000553308 HNF1AP20823 631 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 PRPH2P23942 346 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 NTF4P34130 210 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 NR4A2P43354 598 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 DIO1P49895 249 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 RUNX1T1Q06455 604 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 TIGD2Q4W5G0 525 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 DCST2Q5T1A1 773 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 CLEC6AQ6EIG7 209 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 TIFABQ6ZNK6 161 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 FRMD7Q6ZUT3 714 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 LCA5Q86VQ0 697 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 LSRQ86X29 649 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-209ENST00000553308 DEPDC4Q8N2C3 294 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 OR2T11Q8NH01 316 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 OR5W2Q8NH69 310 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 DNAJA3Q96EY1 480 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 C1orf159Q96HA4 380 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 FCRL1Q96LA6 429 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 SORCS2Q96PQ0 1159 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 STACQ99469 402 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 FMO2Q99518 471 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 CCT7Q99832 543 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 PIMREGQ9BSJ6 248 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 SOX7Q9BT81 388 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 PIGUQ9H490 435 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 C1orf109Q9NX04 203 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 TAS2R16Q9NYV7 291 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 BAIAP2L1Q9UHR4 511 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 EMCNQ9ULC0 261 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 ATP23Q9Y6H3 246 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 PLCE1Q9P212 2302 aa7.97□□□□□ -1.13
SYNE2-209ENST00000553308 IGKV3D-15A0A087WSY6 115 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ZNF716A6NP11 495 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ATP6V1G2-DDX39BF2Z307 99 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 NPIPB9F8W1W9 429 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 G3V2L1 256 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 SULT2B1O00204 365 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ETV2O00321 342 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ZNF264O43296 627 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 GSTA1P08263 222 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ITGA5P08648 1049 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 UROSP10746 265 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 UBL4AP11441 157 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ECHS1P30084 290 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 CASQ1P31415 396 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 PDLIM4P50479 330 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ATP12AP54707 1039 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 RPL38P63173 70 aaKnown RBP7.96□□□□□ -1.14
SYNE2-209ENST00000553308 SLC25A3Q00325 362 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 CHRNB3Q05901 458 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 TP53BP2Q13625 1128 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 CBFBQ13951 182 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 GABRA6Q16445 453 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 CARTPTQ16568 116 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 CR1LQ2VPA4 569 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 PDZK1Q5T2W1 519 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 C9orf135Q5VTT2 229 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 LIPNQ5VXI9 398 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ZYG11AQ6WRX3 759 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 SYT10Q6XYQ8 523 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 WDR31Q8NA23 367 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 TOR1AIP2Q8NFQ8 470 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 APH1AQ96BI3 265 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 FBXO17Q96EF6 278 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 METTL2AQ96IZ6 378 aaKnown RBP7.96□□□□□ -1.14
SYNE2-209ENST00000553308 HOXD1Q9GZZ0 328 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 ASB6Q9NWX5 421 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 EMC3Q9P0I2 261 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 MALT1Q9UDY8 824 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 NOSIPQ9Y314 301 aaKnown RBP7.96□□□□□ -1.14
SYNE2-209ENST00000553308 DTNAQ9Y4J8 743 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 PMF1-BGLAPU3KQ54 211 aa7.96□□□□□ -1.14
SYNE2-209ENST00000553308 CENPVL1A0A0U1RR11 272 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 SLC28A1O00337 649 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 EIF4E2O60573 245 aaKnown RBP7.95□□□□□ -1.14
SYNE2-209ENST00000553308 CYP7B1O75881 506 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 TGFAP01135 160 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 MYL2P10916 166 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 BMP4P12644 408 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 ITGA2P17301 1181 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 APOBEC3AP31941 199 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-209ENST00000553308 SESN3P58005 492 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 CSNK2A1P68400 391 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-209ENST00000553308 PHC1P78364 1004 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 MERTKQ12866 999 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 SKP2Q13309 424 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 SQLEQ14534 574 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms