RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PIP5K1BO14986 540 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 TO15178 435 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 GSC2O15499 205 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 PJA2O43164 708 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 CXCL13O43927 109 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 BCAS2O75934 225 aaPredicted RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 LYZL6O75951 148 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 INMTO95050 263 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 SCELO95171 688 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 CLPSP04118 112 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 TK1P04183 234 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 APRTP07741 180 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 CD22P20273 847 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 MDKP21741 143 aaPredicted RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 GPX3P22352 226 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 IL12BP29460 328 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 PCGF2P35227 344 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 PTPN7P35236 360 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 SSR2P43308 183 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 PPOXP50336 477 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 XKP51811 444 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 SEC24CP53992 1094 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 GNG11P61952 73 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 SARNPP82979 210 aaKnown RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 RIN1Q13671 783 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 BEAN1Q3B7T3 259 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 ZNF311Q5JNZ3 666 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 SH2D4BQ5SQS7 431 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 CPTPQ5TA50 214 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 FAM205BPQ63HN1 556 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 TMEM200BQ69YZ2 307 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 HBMQ6B0K9 141 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 ASPHD2Q6ICH7 369 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 ADNP2Q6IQ32 1131 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 LEG1Q6P5S2 330 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 C4orf22Q6V702 233 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 LARP4Q71RC2 724 aaKnown RBP eCLIP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 NUFIP2Q7Z417 695 aaKnown RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 GALNT10Q86SR1 603 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 ZNF100Q8IYN0 542 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 RNF10Q8N5U6 811 aaKnown RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 SIGLECL1Q8N7X8 197 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 FADS6Q8N9I5 356 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 IL17RDQ8NFM7 739 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 OR2M3Q8NG83 312 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 OR4K14Q8NGD5 310 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 OR2V1Q8NHB1 315 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 FAM110DQ8TAY7 271 aaPredicted RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 DUSP19Q8WTR2 217 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 LRRC58Q96CX6 371 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 PTCD3Q96EY7 689 aaKnown RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 NEIL1Q96FI4 390 aaPredicted RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 CMTM7Q96FZ5 175 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 CITED1Q99966 193 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 FAM118BQ9BPY3 351 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 KCNS3Q9BQ31 491 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 LPAR2Q9HBW0 351 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 TMEM140Q9NV12 185 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 MED11Q9P086 117 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 NTMQ9P121 344 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 KLHL13Q9P2N7 655 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 AASSQ9UDR5 926 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 PSME2Q9UL46 239 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 ZNF490Q9ULM2 529 aaPredicted RBP4.49□□□□□ -1.69
CKAP4-203ENST00000553039 PLCE1Q9P212 2302 aa4.49□□□□□ -1.69
CKAP4-203ENST00000553039 A0A1W2PPH5 198 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 ZC3H12DA2A288 527 aaKnown RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 C5orf63A6NC05 138 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 PRSS29PA6NIE9 313 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 GJE1A6NN92 205 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 C3orf84H3BNL1 204 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 PRAMEF4O60810 478 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 TGFB1P01137 390 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 IFNB1P01574 187 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 ALOX5P09917 674 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 OR4A8P0C604 315 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 PORP16435 677 aaPredicted RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 ZNF17P17021 662 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SERPINB1P30740 379 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 CASQ1P31415 396 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SLC1A3P43003 542 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 MAGEA1P43355 309 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 GPR6P46095 362 aaPredicted RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 OR3A2P47893 321 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 MTNR1AP48039 350 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 RAP1GDS1P52306 607 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 TERF1P54274 439 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 RWDD2BP57060 319 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 ERVFRD-1P60508 538 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 RAB10P61026 200 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 POU6F2P78424 691 aaPredicted RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 CD83Q01151 205 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 TNFRSF17Q02223 184 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 COL10A1Q03692 680 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 DUSP2Q05923 314 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 C17orf67Q0P5P2 114 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 ZP4Q12836 540 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 IKZF1Q13422 519 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 EFNB3Q15768 340 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 KPRPQ5T749 579 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms