RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 CDK3Q00526 305 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 FOXK2Q01167 660 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 PLAURQ03405 335 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 RIPPLY1Q0D2K3 151 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 SNTA1Q13424 505 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 KLF9Q13886 244 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-212ENST00000552491 ZNF267Q14586 743 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-212ENST00000552491 TRAM1Q15629 374 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 STPG1Q5TH74 334 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 HEPHL1Q6MZM0 1159 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 SEZ6L2Q6UXD5 910 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 Q6ZTK2 550 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 ADGRD2Q7Z7M1 963 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 OR4N5Q8IXE1 308 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 TOMM5Q8N4H5 51 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 OR13C2Q8NGS9 318 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 FANK1Q8TC84 345 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 ADAMTS14Q8WXS8 1223 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 GHSRQ92847 366 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 MSANTD3Q96H12 275 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 RADILQ96JH8 1075 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 FERD3LQ96RJ6 166 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 C1QTNF2Q9BXJ5 285 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 ADGRL4Q9HBW9 690 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 MBNL1Q9NR56 388 aaKnown RBP5.02□□□□□ -1.61
LIMA1-212ENST00000552491 ANKRD10Q9NXR5 420 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 SPHK1Q9NYA1 384 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 NKIRAS2Q9NYR9 191 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 KCNE5Q9UJ90 142 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 OR1A2Q9Y585 309 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 ALPK2Q86TB3 2170 aa5.02□□□□□ -1.61
LIMA1-212ENST00000552491 TRAV27A0A087WT01 109 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SYNDIG1LA6NDD5 238 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TRABD2BA6NFA1 517 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 IGLON5A6NGN9 336 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 OR52A4PA6NMU1 304 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TRIM77I1YAP6 450 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SLC9A3R1O14745 358 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 OR7A10O76100 309 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 IFNA7P01567 189 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 MT-ND5P03915 603 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SBK2P0C263 348 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 H2AFB2P0C5Z0 115 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 EPXP11678 715 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SLC2A5P22732 501 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 PYCR1P32322 319 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 MAGEB1P43366 347 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ST8SIA6P61647 398 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 RPS7P62081 194 aaKnown RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 EEF1A1P68104 462 aaKnown RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 HSF2Q03933 536 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CRMP1Q14194 572 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 GPR68Q15743 365 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CEBPEQ15744 281 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 GRK1Q15835 563 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 DUSP5Q16690 384 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 HNRNPA1L2Q32P51 320 aaKnown RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TMEM52BQ4KMG9 183 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 FNDC3BQ53EP0 1204 aaKnown RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TMEM35AQ53FP2 167 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CLLU1Q5K131 121 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 DMKNQ6E0U4 476 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SFRP4Q6FHJ7 346 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 FAAH2Q6GMR7 532 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 MFSD12Q6NUT3 480 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CNKSR3Q6P9H4 555 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 BRICD5Q6PL45 260 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 BTN2A1Q7KYR7 527 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 NLRC3Q7RTR2 1065 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 HDDC2Q7Z4H3 204 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 LNX2Q8N448 690 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 KCT2Q8NC54 265 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TTLQ8NG68 377 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ADAMTS15Q8TE58 950 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 POF1BQ8WVV4 589 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 HHIPL1Q96JK4 782 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 C10orf90Q96M02 699 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 C7orf50Q9BRJ6 194 aaKnown RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ACTRT3Q9BYD9 372 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CLEC4MQ9H2X3 399 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 FN3KQ9H479 309 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 METTL17Q9H7H0 456 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 INPP5EQ9NRR6 644 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CLDND1Q9NY35 253 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 OR6C2Q9NZP2 312 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ST6GALNAC2Q9UJ37 374 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 KCNK6Q9Y257 313 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 NPFFR2Q9Y5X5 522 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 DENND4AQ7Z401 1863 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TICRRQ7Z2Z1 1910 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 MUC22E2RYF6 1773 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 LTBP2Q14767 1821 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 A0A087WV48 116 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 PEX12O00623 359 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 IMPA2O14732 288 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 PRICKLE3O43900 615 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 UBL3O95164 117 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TFP02787 698 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 PTHLHP12272 177 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 UGT2B7P16662 529 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms