RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 DYRK3O43781 588 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 MSL3P1P0C860 447 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 FBLP22087 321 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 RORAP35398 523 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 ADH7P40394 386 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 GPR143P51810 404 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF45Q02386 682 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 CRYZQ08257 329 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 FHL1Q13642 323 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 PRPF38BQ5VTL8 546 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 RTL4Q6ZR62 310 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 GATAD2AQ86YP4 633 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 UBALD2Q8IYN6 164 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC43A2Q8N370 569 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 OR52N1Q8NH53 320 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 OIT3Q8WWZ8 545 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 PTP4A1Q93096 173 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 HCAR1Q9BXC0 346 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 MCCC2Q9HCC0 563 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 DAPK2Q9UIK4 370 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 CLCA3PQ9Y6N3 262 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 ASXL3Q9C0F0 2248 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 A0A087WUJ7 227 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 PRR23D1E9PI22 279 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 PLD2O14939 933 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 IL33O95760 270 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 DDAH2O95865 285 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 IGKV3-11P04433 115 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 PRR23D2P0DMB1 279 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 RPS25P62851 125 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 ACSM1Q08AH1 577 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 OXA1LQ15070 435 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 TRIM16LQ309B1 348 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF362Q5T0B9 420 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 FNDC7Q5VTL7 733 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 SLITRK4Q8IW52 837 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 SIRT6Q8N6T7 355 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC37A3Q8NCC5 494 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 C7orf57Q8NEG2 295 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 OR51G2Q8NGK0 314 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 OR4C6Q8NH72 309 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF721Q8TF20 911 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 DNAJA4Q8WW22 397 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 TMEM203Q969S6 136 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 KCNS3Q9BQ31 491 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 OR8D2Q9GZM6 311 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 NXF5Q9H1B4 397 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 MKKSQ9NPJ1 570 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 UBQLN4Q9NRR5 601 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 CRNNQ9UBG3 495 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 HEATR5AQ86XA9 2040 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 PNMA8CA0A1B0GUJ8 204 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 TCRBV16S1A1N1A0A5B0 115 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 ZC3H12DA2A288 527 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 SAGE2PA6NJ88 616 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 RIIAD1A6NNX1 92 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 GNB5O14775 395 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC30A4O14863 429 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 PPP1R3DO95685 299 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 LALBAP00709 142 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 PEPDP12955 493 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 HK1P19367 917 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC6A6P31641 620 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 GABRA5P31644 462 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 ETV6P41212 452 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 ARRB1P49407 418 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 RORCP51449 518 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 PSMD7P51665 324 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 EFNA3P52797 238 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 COPZ1P61923 177 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 ELAVL1Q15717 326 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 B3GLCTQ6Y288 498 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF527Q8NB42 609 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 FAM71CQ8NEG0 241 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC2A12Q8TD20 617 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 KISS1RQ969F8 398 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 ADIPOR1Q96A54 375 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF501Q96CX3 271 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 SGTBQ96EQ0 304 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 C1GALT1C1Q96EU7 318 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 LCORQ96JN0 433 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 DPYSL5Q9BPU6 564 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 NUDT22Q9BRQ3 303 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 SNTG1Q9NSN8 517 aa12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 YARS2Q9Y2Z4 477 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 ARID1BQ8NFD5 2236 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-216ENST00000552199 SDK1Q7Z5N4 2213 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CCDC182A6NF36 153 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 FRG2CA6NGY1 282 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CTDSP2O14595 271 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 PPM1BO75688 479 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 UPK1BO75841 260 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CDRT1O95170 752 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 UTS2O95399 124 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 IL1AP01583 271 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms