RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 C15orf62A8K5M9 175 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 PGRMC1O00264 195 aaKnown RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 MPPED1O15442 326 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 CYTH3O43739 400 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 NDUFA10O95299 355 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 RAB3DO95716 219 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 TTLL1O95922 423 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 IFNW1P05000 195 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 GPIP06744 558 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 CHRM5P08912 532 aaPredicted RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 SLC35E2BP0CK96 405 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 SLC35E2P0CK97 266 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 ADORA3P0DMS8 318 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 IMPDH1P20839 514 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 ZFP36P26651 326 aaKnown RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 CCKBRP32239 447 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 MAGOHP61326 146 aaKnown RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 VSNL1P62760 191 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 CDKL1Q00532 357 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 CYP24A1Q07973 514 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 KLRB1Q12918 225 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 SERTAD2Q14140 314 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 HLA-BQ31612 363 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 UTF1Q5T230 341 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 THOC7Q6I9Y2 204 aaKnown RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 ADAM5Q6NVV9 412 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 LANCL3Q6ZV70 420 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 SLC29A4Q7RTT9 530 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 APRG1Q8IVJ8 170 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 CDK20Q8IZL9 346 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 SPAG16Q8N0X2 631 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 JAGN1Q8N5M9 183 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 TRAM1L1Q8N609 369 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 ARFGAP1Q8N6T3 406 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 OR4F6Q8NGB9 312 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 OR2L8Q8NGY9 312 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 SLC35F5Q8WV83 523 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 BADQ92934 168 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 C18orf25Q96B23 403 aaPredicted RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 TMA16Q96EY4 203 aaKnown RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 PCED1BQ96HM7 432 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 DNAJC1Q96KC8 554 aaKnown RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 HSD17B14Q9BPX1 270 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 DCTN5Q9BTE1 182 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 RPP25Q9BUL9 199 aaKnown RBP5.55□□□□□ -1.52
VPS29-210ENST00000552130 RACGAP1Q9H0H5 632 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 SLITRK2Q9H156 845 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 SLC25A51Q9H1U9 297 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 KLRF1Q9NZS2 232 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 ZNHIT2Q9UHR6 403 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 PTGDR2Q9Y5Y4 395 aa5.55□□□□□ -1.52
VPS29-210ENST00000552130 A0A1B0GUS0 222 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 GOLGA6L4A6NEF3 574 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 CCDC182A6NF36 153 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 C2CD4DB7Z1M9 353 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 AIM2O14862 343 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 CASKO14936 926 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 DENRO43583 198 aaKnown RBP5.54□□□□□ -1.52
VPS29-210ENST00000552130 SLC19A2O60779 497 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 ADAP1O75689 374 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 ALDOBP05062 364 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 MBL2P11226 248 aaPredicted RBP5.54□□□□□ -1.52
VPS29-210ENST00000552130 CA4P22748 312 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 GLRA1P23415 457 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 HTR2CP28335 458 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 TMEM50BP56557 158 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 KRTAP10-9P60411 292 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 TAF10Q12962 218 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 CAPRIN1Q14444 709 aaKnown RBP5.54□□□□□ -1.52
VPS29-210ENST00000552130 SLC15A2Q16348 729 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 SLC22A6Q4U2R8 563 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 TP53I3Q53FA7 332 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 BEND6Q5SZJ8 279 aaPredicted RBP5.54□□□□□ -1.52
VPS29-210ENST00000552130 REEP3Q6NUK4 255 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 LEG1Q6P5S2 330 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 GPALPP1Q8IXQ4 340 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 ZNF100Q8IYN0 542 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 RCOR2Q8IZ40 523 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 LIX1Q8N485 282 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 OR5D18Q8NGL1 313 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 OR5M1Q8NGP8 315 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 LGALS14Q8TCE9 139 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 GPR151Q8TDV0 419 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 GPR148Q8TDV2 347 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 XPO6Q96QU8 1125 aaKnown RBP5.54□□□□□ -1.52
VPS29-210ENST00000552130 CYP2S1Q96SQ9 504 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 SLC6A7Q99884 636 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 MAPKAP1Q9BPZ7 522 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 CCDC28BQ9BUN5 200 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 TOLLIPQ9H0E2 274 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 CXXC4Q9H2H0 198 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 OR51B6Q9H340 312 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 AAMDCQ9H7C9 122 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 KIR3DX1Q9H7L2 352 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 POPDC2Q9HBU9 364 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 VCX3AQ9NNX9 186 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 SLC38A7Q9NVC3 462 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 USE1Q9NZ43 259 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 ZNF282Q9UDV7 671 aaPredicted RBP5.54□□□□□ -1.52
VPS29-210ENST00000552130 IL36AQ9UHA7 158 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms