RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 NUFIP2Q7Z417 695 aaKnown RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 ZNF619Q8N2I2 560 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 TMCO5AQ8N6Q1 288 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 ZFP90Q8TF47 636 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 ZNF75CPQ92670 426 aaPredicted RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 OR52E6Q96RD3 313 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 POLE3Q9NRF9 147 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 PAQR5Q9NXK6 330 aaPredicted RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 MCTS1Q9ULC4 181 aaKnown RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 PCDHGB4Q9UN71 923 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 TRPC5OSA6NMA1 111 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 C16orf97H3BN30 126 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 AP3D1O14617 1153 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 SMAD9O15198 467 aaKnown RBP11.6□□□□□ -0.55
NPAS3-209ENST00000551008 GCM2O75603 506 aaPredicted RBP11.6□□□□□ -0.55
NPAS3-209ENST00000551008 SYNGR4O95473 234 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 RAF1P04049 648 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 EXOC3L2Q2M3D2 409 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 TIGD2Q4W5G0 525 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 AGBL2Q5U5Z8 902 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 ATG16L1Q676U5 607 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 TFAP2EQ6VUC0 442 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 DNAJC14Q6Y2X3 702 aaPredicted RBP11.6□□□□□ -0.55
NPAS3-209ENST00000551008 PLEKHM3Q6ZWE6 761 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 CXorf67Q86X51 503 aaPredicted RBP11.6□□□□□ -0.55
NPAS3-209ENST00000551008 ATP6V1C2Q8NEY4 427 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 PNPT1Q8TCS8 783 aaKnown RBP11.6□□□□□ -0.55
NPAS3-209ENST00000551008 ST8SIA1Q92185 356 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 CNOT9Q92600 299 aaKnown RBP11.6□□□□□ -0.55
NPAS3-209ENST00000551008 CCDC106Q9BWC9 280 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 PRRG4Q9BZD6 226 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 SLCO1B3Q9NPD5 702 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 SDR39U1Q9NRG7 319 aaPredicted RBP11.6□□□□□ -0.55
NPAS3-209ENST00000551008 ACER3Q9NUN7 267 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 EXD2Q9NVH0 621 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 KLHL13Q9P2N7 655 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 STOML1Q9UBI4 398 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 NDRG3Q9UGV2 375 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 EMC9Q9Y3B6 208 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 PLCE1Q9P212 2302 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 USF3Q68DE3 2245 aa11.6□□□□□ -0.55
NPAS3-209ENST00000551008 KLF4O43474 513 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 ERLIN1O75477 346 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 CYP7B1O75881 506 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 AGR2O95994 175 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 DNASE1P24855 282 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 CHI3L1P36222 383 aaPredicted RBP11.59□□□□□ -0.55
NPAS3-209ENST00000551008 CTBP2P56545 445 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 CBFBQ13951 182 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 DEFB113Q30KQ7 82 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 ATAD3BQ5T9A4 648 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 SEZ6L2Q6UXD5 910 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 EIF3MQ7L2H7 374 aaKnown RBP11.59□□□□□ -0.55
NPAS3-209ENST00000551008 FCRLAQ7L513 359 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 TGIF2LYQ8IUE0 185 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 TUSC5Q8IXB3 177 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 GABRG1Q8N1C3 465 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 VPS37AQ8NEZ2 397 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 PIWIL2Q8TC59 973 aaKnown RBP11.59□□□□□ -0.55
NPAS3-209ENST00000551008 OIT3Q8WWZ8 545 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 CPNE4Q96A23 557 aaPredicted RBP11.59□□□□□ -0.55
NPAS3-209ENST00000551008 VPS33AQ96AX1 596 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 AURKBQ96GD4 344 aaPredicted RBP11.59□□□□□ -0.55
NPAS3-209ENST00000551008 ZC3HAV1LQ96H79 300 aaKnown RBP11.59□□□□□ -0.55
NPAS3-209ENST00000551008 ALPK1Q96QP1 1244 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 PANX1Q96RD7 426 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 PSD2Q9BQI7 771 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 MED18Q9BUE0 208 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 RSPO3Q9BXY4 272 aaPredicted RBP11.59□□□□□ -0.55
NPAS3-209ENST00000551008 KLHL4Q9C0H6 718 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 C12orf49Q9H741 205 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 DLL4Q9NR61 685 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 GLRX2Q9NS18 164 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 NKIRAS1Q9NYS0 192 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 ZIM2Q9NZV7 527 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 DSPPQ9NZW4 1301 aa11.59□□□□□ -0.55
NPAS3-209ENST00000551008 AGAP5A6NIR3 686 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF814B7Z6K7 855 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 SLCO1B7G3V0H7 640 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 PLGP00747 810 aaPredicted RBP11.58□□□□□ -0.56
NPAS3-209ENST00000551008 IDO1P14902 403 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 PSMB1P20618 241 aaKnown RBP11.58□□□□□ -0.56
NPAS3-209ENST00000551008 KCNJ5P48544 419 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 RAC3P60763 192 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 ADAM8P78325 824 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 KCNJ10P78508 379 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 MERTKQ12866 999 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 TSC22D1Q15714 1073 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 GPAT3Q53EU6 434 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 NXNQ6DKJ4 435 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 C3orf33Q6P1S2 294 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 EPGNQ6UW88 154 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 LRRC74BQ6ZQY2 392 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF621Q6ZSS3 439 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 FUNDC1Q8IVP5 155 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 GLB1L3Q8NCI6 653 aaPredicted RBP11.58□□□□□ -0.56
NPAS3-209ENST00000551008 IGFBPL1Q8WX77 278 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 PIK3IP1Q96FE7 263 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 ARL5BQ96KC2 179 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms