RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 OR52L1Q8NGH7 329 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 DNAJA4Q8WW22 397 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 TMCO6Q96DC7 493 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 FOXQ1Q9C009 403 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 RNF32Q9H0A6 362 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 BABAM2Q9NXR7 383 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 MED31Q9Y3C7 131 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 PCDHGB2Q9Y5G2 931 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 TDRD6O60522 2096 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 A0A1W2PPC4 97 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 IMPA2O14732 288 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 NKX2-2O95096 273 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 MAOAP21397 527 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 CRMP1Q14194 572 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 CCDC92Q53HC0 331 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 CNIH2Q6PI25 160 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 XKRXQ6PP77 449 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 TMPRSS11FQ6ZWK6 438 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 BMP8AQ7Z5Y6 402 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 PARGQ86W56 976 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 RNF113BQ8IZP6 322 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 RFLNBQ8N5W9 214 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 ZNF655Q8N720 491 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 OR4C3Q8NH37 302 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 ZDHHC1Q8WTX9 485 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 RIT1Q92963 219 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 RBM18Q96H35 190 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 SMAD5Q99717 465 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 MAP3K3Q99759 626 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 HOXD1Q9GZZ0 328 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 GPR27Q9NS67 375 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 LRIT1Q9P2V4 623 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 TMEM184BQ9Y519 407 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 LRP4O75096 1905 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 IGHV1OR15-9A0A0B4J2B8 117 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 A0A0B4J2E0 115 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 A0A1B0GX12 115 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 DAPL1A0PJW8 107 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 FOXS1O43638 330 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 SHC1P29353 583 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 PGDP52209 483 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 CTBP2P56545 445 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 RAB38P57729 211 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 OR12D2P58182 307 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 SCN1BQ07699 218 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 ZNF267Q14586 743 aaPredicted RBP13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 GXYLT1Q4G148 440 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 GARNL3Q5VVW2 1013 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 OAFQ86UD1 273 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 OOSP2Q86WS3 158 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 CDK20Q8IZL9 346 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 FAM181AQ8N9Y4 354 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 C17orf47Q8NEP4 570 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 OR52N1Q8NH53 320 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 LMF1Q96S06 567 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 TMEM27Q9HBJ8 222 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 B3GAT2Q9NPZ5 323 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 DNAJB12Q9NXW2 375 aaKnown RBP13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 COL6A3P12111 3177 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 CACNA1IQ9P0X4 2223 aa13.07□□□□□ -0.32
CALCOCO1-218ENST00000550804 KIR2DS5A0A0G2JLQ3 304 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 A0A0G2JNG1 304 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 PRR23D1E9PI22 279 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 KIR2DS3K7RE56 304 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 GTPBP1O00178 669 aaKnown RBP13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 RNF13O43567 381 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 PRR23D2P0DMB1 279 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 MAOBP27338 520 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 CRYZQ08257 329 aaKnown RBP13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 STX4Q12846 297 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 KIR2DS5Q14953 304 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.324e-6■■■□□ 16.1
CALCOCO1-218ENST00000550804 ALG10BQ5I7T1 473 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 RSBN1Q5VWQ0 802 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 ARL9Q6T311 187 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 IL20RBQ6UXL0 311 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 NPSR1Q6W5P4 371 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 ZNF517Q6ZMY9 492 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 SSX6Q7RTT6 188 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 SEMA6CQ9H3T2 930 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 PPP1R3EQ9H7J1 279 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 FOLH1BQ9HBA9 442 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 KRCC1Q9NPI7 259 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 CMC2Q9NRP2 79 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 ZMIZ1Q9ULJ6 1067 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 GRIP1Q9Y3R0 1128 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 FRYLO94915 3013 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 CCDC182A6NF36 153 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 ZNF217O75362 1048 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 RCBTB2O95199 551 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 ACVR1BP36896 505 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 KIR2DL3P43628 341 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 STARD6P59095 220 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 COPZ1P61923 177 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 SLC3A1Q07837 685 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 MANEAQ5SRI9 462 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 ARMC6Q6NXE6 501 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 ZCCHC12Q6PEW1 402 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 OR6F1Q8NGZ6 308 aa13.06□□□□□ -0.32
CALCOCO1-218ENST00000550804 OR5W2Q8NH69 310 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms