RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TRIM2Q9C040 744 aa20.45■□□□□ 0.86
SMARCD1-209ENST00000550477 LAT2Q9GZY6 243 aa20.45■□□□□ 0.86
SMARCD1-209ENST00000550477 EXD2Q9NVH0 621 aa20.45■□□□□ 0.86
SMARCD1-209ENST00000550477 PCDHGB4Q9UN71 923 aa20.45■□□□□ 0.86
SMARCD1-209ENST00000550477 SPIN1Q9Y657 262 aaPredicted RBP20.45■□□□□ 0.86
SMARCD1-209ENST00000550477 ABCA1O95477 2261 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 CADP27708 2225 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 DPRXA6NFQ7 191 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 OIP5O43482 229 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 STX11O75558 287 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 PGCP20142 388 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 MATN1P21941 496 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 SOAT1P35610 550 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 ACVR1BP36896 505 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 RNF144AP50876 292 aaPredicted RBP20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 PTGR1Q14914 329 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 GPR68Q15743 365 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 C6orf136Q5SQH8 315 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 DEPDC4Q8N2C3 294 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 MAPK1IP1LQ8NDC0 245 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 AGR3Q8TD06 166 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 SLC25A43Q8WUT9 341 aaPredicted RBP20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 SDF2Q99470 211 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 C1orf50Q9BV19 199 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 THUMPD3Q9BV44 507 aaKnown RBP20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 REPIN1Q9BWE0 567 aaKnown RBP20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 ANKZF1Q9H8Y5 726 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 MKS1Q9NXB0 559 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 MGAT4BQ9UQ53 548 aa20.44■□□□□ 0.86
SMARCD1-209ENST00000550477 SERINC4A6NH21 518 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 TMEM233B4DJY2 109 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 NPIPB9F8W1W9 429 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 SULT2B1O00204 365 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 CSTAP01040 98 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 FKBP2P26885 142 aaKnown RBP20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 PGGHGQ32M88 737 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 PDZK1Q5T2W1 519 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 HMBOX1Q6NT76 420 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 UBE2J2Q8N2K1 259 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 RIBC1Q8N443 379 aaPredicted RBP20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 NEUROG1Q92886 237 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 TUBGCP3Q96CW5 907 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 TRAF4Q9BUZ4 470 aaPredicted RBP20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 YAE1D1Q9NRH1 226 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 PRSS50Q9UI38 385 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 KCNE3Q9Y6H6 103 aa20.43■□□□□ 0.86
SMARCD1-209ENST00000550477 CIB4A0PJX0 185 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 ETV2O00321 342 aaPredicted RBP20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 ANKRD28O15084 1053 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 CD5LO43866 347 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 AGR2O95994 175 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 CDH11P55287 796 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 MERTKQ12866 999 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 NDUFAF6Q330K2 333 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 XKR7Q5GH72 579 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 KLHL17Q6TDP4 642 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 TMEM108Q6UXF1 575 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 TMPPEQ6ZT21 453 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 EIF3MQ7L2H7 374 aaKnown RBP20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 C16orf62Q7Z3J2 963 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 OR5D16Q8NGK9 328 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 OR5AK3PQ8NH89 298 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 POU2F3Q9UKI9 436 aa20.42■□□□□ 0.86
SMARCD1-209ENST00000550477 C9JVG2 144 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 GPR171O14626 319 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 ABCD4O14678 606 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 SMAD9O15198 467 aaKnown RBP20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 IGHV4-39P01824 125 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 TFPIP10646 304 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 DIO1P49895 249 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 DSCR9P59020 149 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 ZNF141Q15928 474 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 PGS1Q32NB8 556 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 ATAD3BQ5T9A4 648 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 C6orf120Q7Z4R8 191 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 MTDHQ86UE4 582 aaKnown RBP20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 DTX2Q86UW9 622 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 ZNF563Q8TA94 476 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 OIT3Q8WWZ8 545 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 ZNF775Q96BV0 537 aaPredicted RBP20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 ZNF300Q96RE9 604 aaPredicted RBP20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 GIMAP2Q9UG22 337 aa20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 SONP18583 2426 aaKnown RBP20.41■□□□□ 0.86
SMARCD1-209ENST00000550477 CCT8L1PA6NM43 557 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 ADAM11O75078 769 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 SKAP2O75563 359 aaPredicted RBP20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 IGHV1-2P23083 117 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 APOBEC1P41238 236 aaKnown RBP20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 NUDT6P53370 316 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 SESN3P58005 492 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 C21orf58P58505 322 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 HBA1P69905 142 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 KRTAP1-1Q07627 177 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 PDK3Q15120 406 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 ARHGAP11BQ3KRB8 267 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 SYT14P1Q58G82 188 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 FBXW9Q5XUX1 488 aa20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 PIAS4Q8N2W9 510 aaPredicted RBP20.4■□□□□ 0.86
SMARCD1-209ENST00000550477 KRTCAP2Q8N6L1 136 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms