RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ELK4P28324 431 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 EIF1P41567 113 aaKnown RBP8.74□□□□□ -1.01
HDAC7-229ENST00000549883 CRATP43155 626 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 MRPL19P49406 292 aaKnown RBP8.74□□□□□ -1.01
HDAC7-229ENST00000549883 CARD18P57730 90 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 DSTNP60981 165 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 MERTKQ12866 999 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 CBFBQ13951 182 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 POU4F3Q15319 338 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF239Q16600 458 aaKnown RBP8.74□□□□□ -1.01
HDAC7-229ENST00000549883 AGKQ53H12 422 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 ANKRD34AQ69YU3 496 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 OR2A2Q6IF42 318 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 LRRC74BQ6ZQY2 392 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 PLEKHM3Q6ZWE6 761 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 EIF3MQ7L2H7 374 aaKnown RBP8.74□□□□□ -1.01
HDAC7-229ENST00000549883 CLIP4Q8N3C7 705 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 TOR1AIP2Q8NFQ8 470 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 SPDL1Q96EA4 605 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 MRGPRX4Q96LA9 322 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 PRRG4Q9BZD6 226 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 PIGMQ9H3S5 423 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF385DQ9H6B1 395 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 HHATLQ9HCP6 504 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 CTPS2Q9NRF8 586 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 POLE3Q9NRF9 147 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 DNAJB12Q9NXW2 375 aaKnown RBP8.74□□□□□ -1.01
HDAC7-229ENST00000549883 TACC2O95359 2948 aa8.74□□□□□ -1.01
HDAC7-229ENST00000549883 ANKRD17O75179 2603 aaKnown RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 A0A096LPI6 279 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 A6NNC1 897 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 CLIC1O00299 241 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 MSTNO14793 375 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 SS18L1O75177 396 aaPredicted RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 SYNGR4O95473 234 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 KRT75O95678 551 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 CRHP06850 196 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 GKN3PP0CG01 181 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 EPXP11678 715 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 PRG2P13727 222 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 NCF2P19878 526 aaPredicted RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ADH6P28332 368 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 IDH2P48735 452 aaKnown RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 STX1BP61266 288 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 HPCAP84074 193 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 LRRC74AQ0VAA2 488 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 RGNQ15493 299 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 EXOC3L2Q2M3D2 409 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 MRPL2Q5T653 305 aaKnown RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 CGB2Q6NT52 195 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF836Q6ZNA1 936 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 MSANTD1Q6ZTZ1 278 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 FAM214BQ7L5A3 538 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF550Q7Z398 422 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 NUFIP2Q7Z417 695 aaKnown RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 CDH24Q86UP0 819 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 COMTD1Q86VU5 262 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ADGRG3Q86Y34 549 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 RNF128Q8TEB7 428 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 FAM222BQ8WU58 562 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF775Q96BV0 537 aaPredicted RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 TMEM19Q96HH6 336 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ARL5BQ96KC2 179 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 WFIKKN1Q96NZ8 548 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 OR5B2Q96R09 309 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 CCDC106Q9BWC9 280 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 POLDIP3Q9BY77 421 aaKnown RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 OR11A1Q9GZK7 315 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ACBD3Q9H3P7 528 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 C12orf49Q9H741 205 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 RMND5AQ9H871 391 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 MTHFD2LQ9H903 347 aaPredicted RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 RASSF1Q9NS23 344 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ACER3Q9NUN7 267 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 KLHL28Q9NXS3 571 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 VAPAQ9P0L0 249 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 FOXD3Q9UJU5 478 aaPredicted RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 ING1Q9UK53 422 aaPredicted RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 LIPT1Q9Y234 373 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 SLC35A3Q9Y2D2 325 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 PRRC2AP48634 2157 aaKnown RBP8.73□□□□□ -1.01
HDAC7-229ENST00000549883 DSPPQ9NZW4 1301 aa8.73□□□□□ -1.01
HDAC7-229ENST00000549883 TRBV5-3A0A0A0MS03 114 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 A0A0G2JND7 137 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 ZC3H12DA2A288 527 aaKnown RBP8.72□□□□□ -1.01
HDAC7-229ENST00000549883 SH3D21A4FU49 640 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF814B7Z6K7 855 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 SMAD9O15198 467 aaKnown RBP8.72□□□□□ -1.01
HDAC7-229ENST00000549883 FRS3O43559 492 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 RAMP1O60894 148 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 PLGP00747 810 aaPredicted RBP8.72□□□□□ -1.01
HDAC7-229ENST00000549883 FCGR2AP12318 317 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 IL7RP16871 459 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 PGCP20142 388 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 AGTR1P30556 359 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 UGT2B10P36537 528 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 CD79BP40259 229 aa8.72□□□□□ -1.01
HDAC7-229ENST00000549883 EEF1A1P68104 462 aaKnown RBP8.72□□□□□ -1.01
HDAC7-229ENST00000549883 SORDQ00796 357 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms