RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 STX11O75558 287 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 UGT2B17O75795 530 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 PLAUP00749 431 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ADAP00813 363 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 CSTAP01040 98 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 YES1P07947 543 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 INHBBP09529 407 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 UBTFL6P0CB48 400 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 OR12D1P0DN82 309 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 UBL4AP11441 157 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 PPP3CBP16298 524 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 PRKCAP17252 672 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ELK4P28324 431 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 SLC7A1P30825 629 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 RYKP34925 604 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 SUMO3P55854 103 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 C21orf58P58505 322 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 PHC1P78364 1004 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 MERTKQ12866 999 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 CBFBQ13951 182 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 MPP2Q14168 576 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 CAPRIN1Q14444 709 aaKnown RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 RNPS1Q15287 305 aaKnown RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF239Q16600 458 aaKnown RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 SMU1Q2TAY7 513 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ARHGAP11BQ3KRB8 267 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 TIGD2Q4W5G0 525 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 BEX5Q5H9J7 111 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ATAD3BQ5T9A4 648 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ANXA8L1Q5VT79 327 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 TNFAIP8L2Q6P589 184 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 PLEKHM3Q6ZWE6 761 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 EIF3MQ7L2H7 374 aaKnown RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 FCRLAQ7L513 359 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 HMGN2P46Q86SG4 172 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 KRTAP1-3Q8IUG1 177 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 MREGQ8N565 214 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ANKRD42Q8N9B4 389 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 VPS37AQ8NEZ2 397 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 OR8J2Q8NGG1 315 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 RNF128Q8TEB7 428 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 CPNE4Q96A23 557 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ARL8AQ96BM9 186 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 S100PBPQ96BU1 408 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ZG16BQ96DA0 208 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 DNAJA3Q96EY1 480 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 PLPPR2Q96GM1 343 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 SLC35G5Q96KT7 338 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 MARK4Q96L34 752 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 MRGPRX4Q96LA9 322 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 OR5B2Q96R09 309 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 NUF2Q9BZD4 464 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 LAT2Q9GZY6 243 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 QRSL1Q9H0R6 528 aaKnown RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 SERINC1Q9NRX5 453 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 EXD2Q9NVH0 621 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ASIC5Q9NY37 505 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 KCNE5Q9UJ90 142 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-211ENST00000547950 GPR52Q9Y2T5 361 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ACTL7BQ9Y614 415 aa5.97□□□□□ -1.45
SCAF11-211ENST00000547950 ELOA3CA0A087WX78 387 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-211ENST00000547950 CENPVL1A0A0U1RR11 272 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 ELOA3DA6NLF2 546 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-211ENST00000547950 H7C1Q1 480 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 SMAD7O15105 426 aaKnown RBP5.96□□□□□ -1.46
SCAF11-211ENST00000547950 TM9SF1O15321 606 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 AK1P00568 194 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 GSNP06396 782 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 TFPIP10646 304 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 LBPP18428 481 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 CCNA2P20248 432 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 PSMB1P20618 241 aaKnown RBP5.96□□□□□ -1.46
SCAF11-211ENST00000547950 UQCRC2P22695 453 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 IL32P24001 234 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 LOXP28300 417 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-211ENST00000547950 S100A3P33764 101 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 CHI3L1P36222 383 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-211ENST00000547950 GATA4P43694 442 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 NR1H2P55055 460 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 SESN3P58005 492 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 RAC3P60763 192 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 UFM1P61960 85 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 LTBQ06643 244 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 BST1Q10588 318 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 SELENBP1Q13228 472 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF141Q15928 474 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 MAPK14Q16539 360 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 ELOA3BQ3SY89 546 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 GPAT3Q53EU6 434 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 SPANXN4Q5MJ08 99 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 Q5PR19 223 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 SFRP5Q5T4F7 317 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 HHATQ5VTY9 493 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 CLEC9AQ6UXN8 241 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 TFAP2EQ6VUC0 442 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF704Q6ZNC4 412 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-211ENST00000547950 C20orf204Q6ZNR8 217 aa5.96□□□□□ -1.46
SCAF11-211ENST00000547950 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.96□□□□□ -1.46
SCAF11-211ENST00000547950 YTHDF3Q7Z739 585 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms