RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ABCD2Q9UBJ2 740 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 CAMK2AQ9UQM7 478 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
DDX54-203ENST00000546869 MBD3L3A6NE82 208 aaPredicted RBP13.04□□□□□ -0.32
DDX54-203ENST00000546869 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
DDX54-203ENST00000546869 GJE1A6NN92 205 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 FAM220BPB1ANY3 271 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 H3BML4 177 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 M0QX08 132 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 SYT5O00445 386 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 ME2P23368 584 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 CEACAM8P31997 349 aaPredicted RBP13.04□□□□□ -0.32
DDX54-203ENST00000546869 SLC1A3P43003 542 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 CLK1P49759 484 aaKnown RBP13.04□□□□□ -0.32
DDX54-203ENST00000546869 NUDT2P50583 147 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 CCR4P51679 360 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
DDX54-203ENST00000546869 RPS3AP61247 264 aaKnown RBP13.04□□□□□ -0.32
DDX54-203ENST00000546869 PMPCAQ10713 525 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 FOXF1Q12946 379 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 SELENBP1Q13228 472 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 C3P1Q6ZMU1 363 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 SEM1Q6ZVN7 128 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 GRINAQ7Z429 371 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 GGNQ86UU5 652 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 ARMC8Q8IUR7 673 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 OR2T12Q8NG77 320 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 OR5M1Q8NGP8 315 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 MBD3L2Q8NHZ7 208 aaPredicted RBP13.04□□□□□ -0.32
DDX54-203ENST00000546869 RND1Q92730 232 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 WNT2BQ93097 391 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 TUBA1CQ9BQE3 449 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 PINK1Q9BXM7 581 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 ADAM19Q9H013 955 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 SERINC1Q9NRX5 453 aa13.04□□□□□ -0.32
DDX54-203ENST00000546869 PCNX3Q9H6A9 2034 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 USP9XQ93008 2570 aaPredicted RBP13.03□□□□□ -0.32
DDX54-203ENST00000546869 FREM3P0C091 2139 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 ELOVL7A1L3X0 281 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 SHISA8B8ZZ34 492 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 H0Y3Z8 333 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 ZG16O60844 167 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 GP1BBP13224 206 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 TCEA1P23193 301 aaKnown RBP13.03□□□□□ -0.32
DDX54-203ENST00000546869 RYKP34925 604 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 KCNJ5P48544 419 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 IDH2P48735 452 aaKnown RBP13.03□□□□□ -0.32
DDX54-203ENST00000546869 CLDN20P56880 219 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 NUP107P57740 925 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 PSME3P61289 254 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 SRYQ05066 204 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 DMTNQ08495 405 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 CTU2Q2VPK5 515 aaKnown RBP13.03□□□□□ -0.32
DDX54-203ENST00000546869 PDSS1Q5T2R2 415 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 WBP2NLQ6ICG8 309 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 PLEKHM3Q6ZWE6 761 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 LILRA2Q8N149 483 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 RPRMLQ8N4K4 120 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 LSMEM1Q8N8F7 131 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 ZNF563Q8TA94 476 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 SLC25A43Q8WUT9 341 aaPredicted RBP13.03□□□□□ -0.32
DDX54-203ENST00000546869 ITLN2Q8WWU7 325 aaPredicted RBP13.03□□□□□ -0.32
DDX54-203ENST00000546869 ASB5Q8WWX0 329 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 ZFP3Q96NJ6 502 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 ARL8BQ9NVJ2 186 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 NDE1Q9NXR1 346 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 TMEM181Q9P2C4 612 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 ZNF175Q9Y473 711 aa13.03□□□□□ -0.32
DDX54-203ENST00000546869 CLCA1A8K7I4 914 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 HSPB2A8KAH6 182 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 NME4O00746 187 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 TPST1O60507 370 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 TOXO94900 526 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 LGI1O95970 557 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 IFNA14P01570 189 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 IL11P20809 199 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 SLC7A2P52569 658 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 COPZ1P61923 177 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 LIPEQ05469 1076 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 MERTKQ12866 999 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 HSPB2Q16082 182 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 SPATS1Q496A3 300 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 C3orf33Q6P1S2 294 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 CHMP1BQ7LBR1 199 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 MRGPRGQ86SM5 289 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 ADGRG3Q86Y34 549 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 MICU2Q8IYU8 434 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 NSL1Q96IY1 281 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 KLHL15Q96M94 604 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 PSMG3-AS1Q96PY0 264 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 TRIB1Q96RU8 372 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 TM9SF2Q99805 663 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 SPAG4Q9NPE6 437 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 KLHL28Q9NXS3 571 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 COQ3Q9NZJ6 369 aa13.02□□□□□ -0.33
DDX54-203ENST00000546869 SPIN1Q9Y657 262 aaPredicted RBP13.02□□□□□ -0.33
DDX54-203ENST00000546869 A0A0J9YW62 118 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 AP3D1O14617 1153 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms