RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 EFNA2O43921 213 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 WDR1O75083 606 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 UBOX5O94941 541 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 PRG2P13727 222 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 IL11P20809 199 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 CD247P20963 164 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 ELK4P28324 431 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 KCNJ5P48544 419 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 FJX1Q86VR8 437 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 GPR32P1Q8NGA4 272 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 CDRT15Q96T59 188 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 ALKBH4Q9NXW9 302 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 PRDM4Q9UKN5 801 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 SLC5A6Q9Y289 635 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 AHRRA9YTQ3 701 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 E9PLN8 166 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 SEMA7AO75326 666 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 C8BP07358 591 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 GP1BBP13224 206 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 GABRA1P14867 456 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 UQCRBP14927 111 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 ACVR2AP27037 513 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 KDELR2P33947 212 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 CLDN15P56746 228 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 RAC1P63000 192 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 SRSF1Q07955 248 aaKnown RBP eCLIP18.47■□□□□ 0.552e-12■■□□□ 12.5
HMGA2-211ENST00000545998 RTL6Q6ICC9 239 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 RINLQ6ZS11 566 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 PLEKHM3Q6ZWE6 761 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 VKORC1Q9BQB6 163 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 ERRFI1Q9UJM3 462 aaPredicted RBP18.47■□□□□ 0.55
HMGA2-211ENST00000545998 MEMO1Q9Y316 297 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 FAM215AQ9Y5M1 114 aa18.47■□□□□ 0.55
HMGA2-211ENST00000545998 DOPEY1Q5JWR5 2465 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 CLEC18AA5D8T8 446 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 SYT5O00445 386 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 CCL21O00585 134 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 LGI1O95970 557 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 HOXD4P09016 255 aaPredicted RBP18.46■□□□□ 0.55
HMGA2-211ENST00000545998 PTGER4P35408 488 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 SLC1A3P43003 542 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 ZNF136P52737 540 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 SUCLG1P53597 346 aaKnown RBP18.46■□□□□ 0.55
HMGA2-211ENST00000545998 CLDN20P56880 219 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 HOXC5Q00444 222 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 SRYQ05066 204 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 MERTKQ12866 999 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 CLEC18BQ6UXF7 455 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 GRINAQ7Z429 371 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 GGNQ86UU5 652 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 RNF148Q8N7C7 305 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 CLEC18CQ8NCF0 446 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 SLC26A7Q8TE54 656 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 RASSF5Q8WWW0 418 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 DMRTA2Q96SC8 542 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 WFDC6Q9BQY6 131 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 KLHL28Q9NXS3 571 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 STOML1Q9UBI4 398 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 CD300AQ9UGN4 299 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 PACSIN3Q9UKS6 424 aa18.46■□□□□ 0.55
HMGA2-211ENST00000545998 KIAA1549Q9HCM3 1950 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 NCOA6Q14686 2063 aaPredicted RBP18.45■□□□□ 0.54
HMGA2-211ENST00000545998 H0YC42 278 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 CXCR6O00574 342 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 HSD17B1P14061 328 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 HTR1EP28566 365 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 APOBEC1P41238 236 aaKnown RBP18.45■□□□□ 0.54
HMGA2-211ENST00000545998 TPD52P55327 224 aaPredicted RBP18.45■□□□□ 0.54
HMGA2-211ENST00000545998 ACSF3Q4G176 576 aaPredicted RBP18.45■□□□□ 0.54
HMGA2-211ENST00000545998 SAMD4BQ5PRF9 694 aaKnown RBP18.45■□□□□ 0.54
HMGA2-211ENST00000545998 C1orf185Q5T7R7 199 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 UBQLNLQ8IYU4 475 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 EID3Q8N140 333 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 LILRA2Q8N149 483 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 RPRMLQ8N4K4 120 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 TNIP2Q8NFZ5 429 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 ZPLD1Q8TCW7 415 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 SMPDL3BQ92485 455 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 FIG4Q92562 907 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 TUBA1CQ9BQE3 449 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 C1orf21Q9H246 121 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 TMEM185BQ9H7F4 350 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 EVA1AQ9H8M9 152 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 CTPS2Q9NRF8 586 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 SLC13A4Q9UKG4 626 aa18.45■□□□□ 0.54
HMGA2-211ENST00000545998 MPDZO75970 2070 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 SPTBN1Q01082 2364 aaKnown RBP18.44■□□□□ 0.54
HMGA2-211ENST00000545998 TMEM229AB2RXF0 380 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 H0Y3Z8 333 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 GSTA4O15217 222 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 IFNA14P01570 189 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 FESP07332 822 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 ME2P23368 584 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 COPZ1P61923 177 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 SELENBP1Q13228 472 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 NRF1Q16656 503 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 LRRC23Q53EV4 343 aaPredicted RBP18.44■□□□□ 0.54
HMGA2-211ENST00000545998 MARVELD2Q8N4S9 558 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 MEIOBQ8N635 442 aa18.44■□□□□ 0.54
HMGA2-211ENST00000545998 ARHGDIGQ99819 225 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms