RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TP53I3Q53FA7 332 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 EIPR1Q53HC9 387 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 PRRT3Q5FWE3 981 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 PLCZ1Q86YW0 608 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 OR2M4Q96R27 311 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 UBL7Q96S82 380 aaPredicted RBP14.62□□□□□ -0.07
LDLR-204ENST00000545707 ERVMER34-1Q9H9K5 563 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 STARD5Q9NSY2 213 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 SLC23A1Q9UHI7 598 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 NCKAP1Q9Y2A7 1128 aa14.62□□□□□ -0.07
LDLR-204ENST00000545707 PLPP2O43688 288 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 AGR2O95994 175 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 APODP05090 189 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 F8A1P23610 371 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 ACSL1P33121 698 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 BMP8BP34820 402 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 CAMK2BQ13554 666 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 TMEM31Q5JXX7 168 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 FHL5Q5TD97 284 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 BMP8AQ7Z5Y6 402 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 SFTPA2Q8IWL1 248 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 TOR1AIP2Q8NFQ8 470 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 ORAI1Q96D31 301 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 ZMYND19Q96E35 227 aaPredicted RBP14.61□□□□□ -0.07
LDLR-204ENST00000545707 PGLYRP3Q96LB9 341 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 ORAI3Q9BRQ5 295 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 TMEM168Q9H0V1 697 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 FN3KQ9H479 309 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 C19orf53Q9UNZ5 99 aaPredicted RBP14.61□□□□□ -0.07
LDLR-204ENST00000545707 CACNG2Q9Y698 323 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 SLC22A31A6NKX4 558 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 CHP2O43745 196 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 TRIM3O75382 744 aaPredicted RBP14.61□□□□□ -0.07
LDLR-204ENST00000545707 RCBTB2O95199 551 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 DBIP07108 87 aaKnown RBP14.61□□□□□ -0.07
LDLR-204ENST00000545707 THBS1P07996 1170 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 NPR2P20594 1047 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 TLX1P31314 330 aaPredicted RBP14.61□□□□□ -0.07
LDLR-204ENST00000545707 ACTR1BP42025 376 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 ADPRHP54922 357 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 ACTR1AP61163 376 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 AMZ1Q400G9 498 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 GARNL3Q5VVW2 1013 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 ZNF776Q68DI1 518 aaPredicted RBP14.61□□□□□ -0.07
LDLR-204ENST00000545707 FCRL6Q6DN72 434 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 FAAH2Q6GMR7 532 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 LYPD4Q6UWN0 246 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 USP53Q70EK8 1073 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 CDK20Q8IZL9 346 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 SLC44A3Q8N4M1 653 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 OR4C6Q8NH72 309 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 FLVCR1-AS1Q8TAF5 88 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 PATE1Q8WXA2 126 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 SERINC2Q96SA4 455 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 GTPBP2Q9BX10 602 aaKnown RBP14.61□□□□□ -0.07
LDLR-204ENST00000545707 IGFLR1Q9H665 355 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 FLRT3Q9NZU0 649 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 PHF11Q9UIL8 331 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 MED31Q9Y3C7 131 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 SLC22A7Q9Y694 548 aa14.61□□□□□ -0.07
LDLR-204ENST00000545707 LRRN3E7EW58 273 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 IMPA2O14732 288 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 SOX30O94993 753 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 NGFRP08138 427 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 SMIM10L1P0DMW3 83 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 GALP22466 123 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 CCR6P51684 374 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 SHC2P98077 582 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 SLC36A2Q495M3 483 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 FAM109BQ6ICB4 259 aaPredicted RBP14.6□□□□□ -0.07
LDLR-204ENST00000545707 DGAT2L6Q6ZPD8 337 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 PRSS45Q7RTY3 260 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 YAF2Q8IY57 180 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 IZUMO1Q8IYV9 350 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 SMIM10Q96HG1 83 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 MS4A3Q96HJ5 214 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 MED28Q9H204 178 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 LRRN3Q9H3W5 708 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 BEX1Q9HBH7 125 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 WSB2Q9NYS7 404 aaPredicted RBP14.6□□□□□ -0.07
LDLR-204ENST00000545707 ZNF222Q9UK12 451 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 OR6C74A6NCV1 312 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 RIIAD1A6NNX1 92 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 UGT2B7P16662 529 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 GDI1P31150 447 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 NAA10P41227 235 aaPredicted RBP14.6□□□□□ -0.07
LDLR-204ENST00000545707 DGCR2P98153 550 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 FIGLAQ6QHK4 219 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 TMPRSS11FQ6ZWK6 438 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 RNF113BQ8IZP6 322 aaKnown RBP14.6□□□□□ -0.07
LDLR-204ENST00000545707 SDR9C7Q8NEX9 313 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 BEST4Q8NFU0 473 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 OR11H7Q8NGC8 314 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 NT5CQ8TCD5 201 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 TM4SF19Q96DZ7 209 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 SLC35A3Q9Y2D2 325 aa14.6□□□□□ -0.07
LDLR-204ENST00000545707 SPEGQ15772 3267 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 PLRG1O43660 514 aaKnown RBP14.59□□□□□ -0.07
LDLR-204ENST00000545707 PTP4A3O75365 173 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 ATXN8OSP0DMR3 200 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms