RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 EMG1Q92979 244 aaKnown RBP3.34□□□□□ -1.87
SNHG1-222ENST00000545308 MOCOSQ96EN8 888 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 SLC41A3Q96GZ6 507 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 ELMO2Q96JJ3 720 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 AGAP4Q96P64 663 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 LGMNQ99538 433 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 CCT7Q99832 543 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 C19orf43Q9BQ61 176 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 TCHPQ9BT92 498 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 TMEM121Q9BTD3 319 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 CABLES2Q9BTV7 478 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 RAB18Q9NP72 206 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 RNF14Q9UBS8 474 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 SEC14L4Q9UDX3 406 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 PTBP2Q9UKA9 531 aaKnown RBP3.34□□□□□ -1.87
SNHG1-222ENST00000545308 DHRS7Q9Y394 339 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 EXOSC1Q9Y3B2 195 aaKnown RBP3.34□□□□□ -1.87
SNHG1-222ENST00000545308 NAALAD2Q9Y3Q0 740 aa3.34□□□□□ -1.87
SNHG1-222ENST00000545308 PARP14Q460N5 1801 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 NAV1Q8NEY1 1877 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 IGHV4-30-2A0A087WSY4 118 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 FAM74A7A6NL05 159 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 TFECO14948 347 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-222ENST00000545308 STX7O15400 261 aaKnown RBP3.33□□□□□ -1.88
SNHG1-222ENST00000545308 MBTPS2O43462 519 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 HCKP08631 526 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 FCGR3AP08637 254 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 UBTFL1P0CB47 393 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-222ENST00000545308 PCMT1P22061 227 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 PSMA2P25787 234 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 CALML3P27482 149 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 CSRP3P50461 194 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 AIF1P55008 147 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 TMEM50BP56557 158 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 ZNF33BQ06732 778 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 NECTIN1Q15223 517 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 SYPL1Q16563 259 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 TMEM30BQ3MIR4 351 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 GGTA1PQ4G0N0 100 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 FAM74A3Q4VXF1 159 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 CELF3Q5SZQ8 465 aaKnown RBP3.33□□□□□ -1.88
SNHG1-222ENST00000545308 LINC00242Q5T6M2 205 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 SEL1L3Q68CR1 1132 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 CXCL17Q6UXB2 119 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 TSEN54Q7Z6J9 526 aaKnown RBP3.33□□□□□ -1.88
SNHG1-222ENST00000545308 ANKRD37Q7Z713 158 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 KIAA1328Q86T90 577 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 RPAINQ86UA6 219 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 ZNF614Q8N883 585 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 OR13C2Q8NGS9 318 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 FAM3CQ92520 227 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 FBXO17Q96EF6 278 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 DNAJA3Q96EY1 480 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 C11orf24Q96F05 449 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-222ENST00000545308 ZBTB18Q99592 522 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 FAM173AQ9BQD7 235 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 MTG1Q9BT17 334 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-222ENST00000545308 CCDC28BQ9BUN5 200 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 CRNKL1Q9BZJ0 848 aaKnown RBP3.33□□□□□ -1.88
SNHG1-222ENST00000545308 TRIM9Q9C026 710 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 STRADBQ9C0K7 418 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 COMMD4Q9H0A8 199 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 MAGT1Q9H0U3 335 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 MFSD1Q9H3U5 465 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 VCPKMTQ9H867 229 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 MOB1AQ9H8S9 216 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 ESM1Q9NQ30 184 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 ASIC3Q9UHC3 531 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 MUTYHQ9UIF7 546 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 GAB2Q9UQC2 676 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 RFX7Q2KHR2 1363 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 ZNF292O60281 2723 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 PLXNA3P51805 1871 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 KMT2EQ8IZD2 1858 aa3.33□□□□□ -1.88
SNHG1-222ENST00000545308 MYH4Q9Y623 1939 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 MYO7AQ13402 2215 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 CACNA1HO95180 2353 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 TPRP12270 2363 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 METTL21EPA6NDL7 271 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 MFSD2BA6NFX1 497 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 LOC730098B7Z3J9 87 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 BTN3A3O00478 584 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 PRRG1O14668 218 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 ARPC3O15145 178 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 SORBS2O94875 1100 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 JCHAINP01591 159 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 CAPN1P07384 714 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 WNT2P09544 360 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 TPSB2P20231 275 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 STK19P49842 368 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 SLC7A2P52569 658 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 PLA2G16P53816 162 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 OSTNP61366 133 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 RPS6P62753 249 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 SRPXP78539 464 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 IL9RQ01113 521 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 EWSR1Q01844 656 aaKnown RBP eCLIP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 DDX39BQ13838 428 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 LY6DQ14210 128 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms