RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TNFAIP8L2Q6P589 184 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-224ENST00000544990 MEX3BQ6ZN04 569 aaKnown RBP6.65□□□□□ -1.34
CPSF7-224ENST00000544990 MSANTD1Q6ZTZ1 278 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 SEM1Q6ZVN7 128 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 MAVSQ7Z434 540 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 P4HA3Q7Z4N8 544 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 ZDHHC13Q8IUH4 622 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 GRAMD2AQ8IUY3 354 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 UBQLNLQ8IYU4 475 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 CLEC4FQ8N1N0 589 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 OIT3Q8WWZ8 545 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-224ENST00000544990 ZBTB8AQ96BR9 441 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 SH3YL1Q96HL8 342 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-224ENST00000544990 ITCHQ96J02 903 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 HRASLS5Q96KN8 279 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 MARK4Q96L34 752 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 CCDC28BQ9BUN5 200 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 NMUR2Q9GZQ4 415 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 ENKD1Q9H0I2 346 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 POLE3Q9NRF9 147 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 MKLN1Q9UL63 735 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 LIPT1Q9Y234 373 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 ZNF337Q9Y3M9 751 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 WDR45Q9Y484 360 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 AP4B1Q9Y6B7 739 aa6.65□□□□□ -1.34
CPSF7-224ENST00000544990 MED12LQ86YW9 2145 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 INTS1Q8N201 2190 aaKnown RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 FAM234BA2RU67 622 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 SERINC4A6NH21 518 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 KDM4EB2RXH2 506 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 NPIPB9F8W1W9 429 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF264O43296 627 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 SEC14L5O43304 696 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 EIF4E2O60573 245 aaKnown RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 FCMRO60667 390 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 RCBTB2O95199 551 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 IL18BPO95998 194 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ZCCHC18P0CG32 403 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 TMIGD3P0DMS9 266 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 UBL4AP11441 157 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ME2P23368 584 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 MRPL19P49406 292 aaKnown RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ASCL1P50553 236 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF136P52737 540 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 CASP9P55211 416 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF117Q03924 483 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 CD226Q15762 336 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF141Q15928 474 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 PDZK1Q5T2W1 519 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 OR2A2Q6IF42 318 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ARSKQ6UWY0 536 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 EIF3MQ7L2H7 374 aaKnown RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 GDF7Q7Z4P5 450 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ADGRE4PQ86SQ3 457 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 RNF130Q86XS8 419 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 LIX1LQ8IVB5 337 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 MCEMP1Q8IX19 187 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF619Q8N2I2 560 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 GTPBP8Q8N3Z3 284 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ARFGAP2Q8N6H7 521 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 TMCO5AQ8N6Q1 288 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 TOR1AIP2Q8NFQ8 470 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 OR5M1Q8NGP8 315 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 SMPDL3BQ92485 455 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 RAB8BQ92930 207 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ROPN1LQ96C74 230 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 MISP3Q96FF7 219 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 EBF4Q9BQW3 602 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 SIKE1Q9BRV8 207 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 INPP5KQ9BT40 448 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 SFXN3Q9BWM7 321 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF350Q9GZX5 532 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 SERHL2Q9H4I8 314 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 RABEP2Q9H5N1 569 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 MED17Q9NVC6 651 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 THUMPD1Q9NXG2 353 aaKnown RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 PAQR5Q9NXK6 330 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-224ENST00000544990 CARD8Q9Y2G2 431 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 TEX15Q9BXT5 2789 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 KIAA1549Q9HCM3 1950 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 NOTCH2Q04721 2471 aa6.64□□□□□ -1.35
CPSF7-224ENST00000544990 C7orf72A4D263 438 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TMEM247A6NEH6 219 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 SLC22A20A6NK97 555 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 GJE1A6NN92 205 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 SYT5O00445 386 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 HMGN4O00479 90 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 UGT2B17O75795 530 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CYP7B1O75881 506 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CSTAP01040 98 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 SCG5P05408 212 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CRHP06850 196 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 LINGO3P0C6S8 592 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 NR2F1P10589 423 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 FCGR2AP12318 317 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 PGCP20142 388 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 SSTR2P30874 369 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CDKN2CP42773 168 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CRATP43155 626 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms