RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PELOQ9BRX2 385 aaKnown RBP12.52□□□□□ -0.4
HCFC2-202ENST00000544223 PLCXD1Q9NUJ7 323 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 ENOPH1Q9UHY7 261 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 ADAM18Q9Y3Q7 739 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 MUC6Q6W4X9 2439 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 TMEM200CA6NKL6 621 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 SURF4O15260 269 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 CHP2O43745 196 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 CD36P16671 472 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 GSTM3P21266 225 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 NOS3P29474 1203 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 HOXD12P35452 270 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 TGFBR2P37173 567 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 GRK6P43250 576 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 SNRPGP62308 76 aaKnown RBP12.52□□□□□ -0.41
HCFC2-202ENST00000544223 EFNB1P98172 346 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 SPEM2Q0P670 501 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 FHL1Q13642 323 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 TIGD6Q17RP2 521 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 FNDC7Q5VTL7 733 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 PLBD1Q6P4A8 553 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 OAFQ86UD1 273 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 CPOQ8IVL8 374 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 AGBL5Q8NDL9 886 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 IPCEF1Q8WWN9 437 aaPredicted RBP12.52□□□□□ -0.41
HCFC2-202ENST00000544223 FGF11Q92914 225 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 MYDGFQ969H8 173 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 IFT27Q9BW83 186 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 ENAMQ9NRM1 1142 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 SEC14L4Q9UDX3 406 aa12.52□□□□□ -0.41
HCFC2-202ENST00000544223 SHISA8B8ZZ34 492 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 YKT6O15498 198 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 PPP1R3DO95685 299 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 ACVR2AP27037 513 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 GALNSP34059 522 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 ETV1P50549 477 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 PLAG1Q6DJT9 500 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 SLCO6A1Q86UG4 719 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 GRAMD2AQ8IUY3 354 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 NFAM1Q8NET5 270 aaPredicted RBP12.51□□□□□ -0.41
HCFC2-202ENST00000544223 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 OR51L1Q8NGJ5 315 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 METTL21AQ8WXB1 218 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 TUBA1CQ9BQE3 449 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 POLDIP3Q9BY77 421 aaKnown RBP12.51□□□□□ -0.41
HCFC2-202ENST00000544223 TGIF2Q9GZN2 237 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 ANKRD19PQ9H560 264 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 HINT3Q9NQE9 182 aaKnown RBP12.51□□□□□ -0.41
HCFC2-202ENST00000544223 PCDHGB1Q9Y5G3 927 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 URB1O60287 2271 aaKnown RBP12.51□□□□□ -0.41
HCFC2-202ENST00000544223 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 IGLV3-12A0A075B6K2 115 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 LOC100506127A0A0U1RQW1 187 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 EFCAB9A8MZ26 197 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF264O43296 627 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 SOX30O94993 753 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 IFI6P09912 130 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 STAT5AP42229 794 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 SLC15A1P46059 708 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 COPZ1P61923 177 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 PRKCDQ05655 676 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 NFATC3Q12968 1075 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 PGGHGQ32M88 737 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF613Q6PF04 617 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 BMP8AQ7Z5Y6 402 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 LHFPL3Q86UP9 236 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF563Q8TA94 476 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 TMEM163Q8TC26 289 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 DUSP19Q8WTR2 217 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 HS6ST2Q96MM7 605 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 MOGAT1Q96PD6 335 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 TBX5Q99593 518 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 TTTY10Q9BZA0 68 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 FN3KQ9H479 309 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 WDR70Q9NW82 654 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 SLC39A1Q9NY26 324 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 SIGLEC7Q9Y286 467 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 CDH10Q9Y6N8 788 aa12.51□□□□□ -0.41
HCFC2-202ENST00000544223 COL5A1P20908 1838 aaPredicted RBP12.51□□□□□ -0.41
HCFC2-202ENST00000544223 IGKV1D-42A0A075B6H8 117 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 TSPAN2O60636 221 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 GADD45AP24522 165 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 SLC16A1P53985 500 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 ARMCX4Q5H9R4 360 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 SYT6Q5T7P8 510 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 ULK3Q6PHR2 472 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 GALNT15Q8N3T1 639 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 LINC00471Q8N535 108 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 C10orf53Q8N6V4 93 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 ZFP41Q8N8Y5 198 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 OR2T33Q8NG76 320 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 OR52I1Q8NGK6 324 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 LGALS12Q96DT0 336 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 YIPF6Q96EC8 236 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 RNFT2Q96EX2 444 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 DOK1Q99704 481 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 TAPBPLQ9BX59 468 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 TRIM2Q9C040 744 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms