RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 LIMS3P0CW19 117 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 LIMS4P0CW20 117 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 ATP1A4Q13733 1029 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 ELAVL1Q15717 326 aaKnown RBP15.69■□□□□ 0.1
PTPRO-209ENST00000543886 KLHL26Q53HC5 615 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 C1orf189Q5VU69 101 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 NIPAL3Q6P499 406 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 THSD4Q6ZMP0 1018 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 PSD4Q8NDX1 1056 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 SLC2A12Q8TD20 617 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 DNAJA4Q8WW22 397 aaPredicted RBP15.69■□□□□ 0.1
PTPRO-209ENST00000543886 UFD1Q92890 307 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 ASPNQ9BXN1 380 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 ZNF768Q9H5H4 540 aaKnown RBP15.69■□□□□ 0.1
PTPRO-209ENST00000543886 ISYNA1Q9NPH2 558 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 MKKSQ9NPJ1 570 aaPredicted RBP15.69■□□□□ 0.1
PTPRO-209ENST00000543886 CMC2Q9NRP2 79 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 UBQLN4Q9NRR5 601 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 TNFRSF10DQ9UBN6 386 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 MRTO4Q9UKD2 239 aaKnown RBP15.69■□□□□ 0.1
PTPRO-209ENST00000543886 BAIAP2Q9UQB8 552 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 VCANP13611 3396 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 FRG2CA6NGY1 282 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 RIIAD1A6NNX1 92 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 IL33O95760 270 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 NGFRP08138 427 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 PAICSP22234 425 aaKnown RBP15.69■□□□□ 0.1
PTPRO-209ENST00000543886 EPHA8P29322 1005 aaPredicted RBP15.69■□□□□ 0.1
PTPRO-209ENST00000543886 FOXK2Q01167 660 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 LHFPL3Q86UP9 236 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 OR4C6Q8NH72 309 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 OIT3Q8WWZ8 545 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 ZNF501Q96CX3 271 aaPredicted RBP15.69■□□□□ 0.1
PTPRO-209ENST00000543886 DUSP23Q9BVJ7 150 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 CCDC163A0A0D9SF12 145 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 SCDO00767 359 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 PTP4A3O75365 173 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 SLC6A6P31641 620 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 NSDHLQ15738 373 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 VWA2Q5GFL6 755 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 PRPF38BQ5VTL8 546 aaKnown RBP15.68■□□□□ 0.1
PTPRO-209ENST00000543886 LINC00114Q6XXX2 140 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 RTL4Q6ZR62 310 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 MEPCEQ7L2J0 689 aaKnown RBP15.68■□□□□ 0.1
PTPRO-209ENST00000543886 SLC43A2Q8N370 569 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 KLHL36Q8N4N3 616 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 GATSQ8NAP1 163 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 ZSCAN1Q8NBB4 408 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 LCORQ96JN0 433 aaPredicted RBP15.68■□□□□ 0.1
PTPRO-209ENST00000543886 ART5Q96L15 291 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 GAL3ST4Q96RP7 486 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 NXF5Q9H1B4 397 aaKnown RBP15.68■□□□□ 0.1
PTPRO-209ENST00000543886 MED20Q9H944 212 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 PEX16Q9Y5Y5 336 aa15.68■□□□□ 0.1
PTPRO-209ENST00000543886 PNMA8CA0A1B0GUJ8 204 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 TCRBV16S1A1N1A0A5B0 115 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 C19orf67A6NJJ6 358 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 PRR23D1E9PI22 279 aaPredicted RBP15.67■□□□□ 0.1
PTPRO-209ENST00000543886 ZNF670-ZNF695F2Z2N8 137 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 PPP1R3DO95685 299 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 DDAH2O95865 285 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 IGHA1P01876 353 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 IGKV3-11P04433 115 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 PRR23D2P0DMB1 279 aaPredicted RBP15.67■□□□□ 0.1
PTPRO-209ENST00000543886 ZNF3P17036 446 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 NOS3P29474 1203 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 HOXA6P31267 233 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 NR0B2Q15466 257 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 ARMC4Q5T2S8 1044 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 PRSS58Q8IYP2 241 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 OR51G2Q8NGK0 314 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 ZNF721Q8TF20 911 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 SGTBQ96EQ0 304 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 TNFRSF13CQ96RJ3 184 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 SECISBP2Q96T21 854 aaKnown RBP15.67■□□□□ 0.1
PTPRO-209ENST00000543886 ARHGAP9Q9BRR9 750 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 SLC7A5P2Q9GIP4 190 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 NUAK2Q9H093 628 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 MUTYHQ9UIF7 546 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.67■□□□□ 0.1
PTPRO-209ENST00000543886 UTS2O95399 124 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 UBL4AP11441 157 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 ADAMTS20P59510 1910 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 TPBGQ13641 420 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 KLHL12Q53G59 568 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 HLA-DQA1Q5Y7H0 255 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 TMEM71Q6P5X7 295 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 TUBA3EQ6PEY2 450 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 MAMSTRQ6ZN01 415 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 SIRT6Q8N6T7 355 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 OR14A16Q8NHC5 309 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 PHOSPHO1Q8TCT1 267 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 TM9SF4Q92544 642 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 DAZLQ92904 295 aaKnown RBP15.67■□□□□ 0.1
PTPRO-209ENST00000543886 TMEM203Q969S6 136 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 JAM3Q9BX67 310 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 MCCC2Q9HCC0 563 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 ERVK13-1Q9NX77 482 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 SUSD2Q9UGT4 822 aa15.67■□□□□ 0.1
PTPRO-209ENST00000543886 A0A087WUJ7 227 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms