RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 TMEM216Q9P0N5 145 aa16■□□□□ 0.15
RAP1B-229ENST00000543393 TMEFF2Q9UIK5 374 aaPredicted RBP16■□□□□ 0.15
RAP1B-229ENST00000543393 NOSIPQ9Y314 301 aaKnown RBP16■□□□□ 0.15
RAP1B-229ENST00000543393 LRP5LA4QPB2 252 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 TRIM49D1C9J1S8 452 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 GTPBP1O00178 669 aaKnown RBP15.99■□□□□ 0.15
RAP1B-229ENST00000543393 ZNF385BQ569K4 471 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 EXOSC6Q5RKV6 272 aaKnown RBP15.99■□□□□ 0.15
RAP1B-229ENST00000543393 OR7E24Q6IFN5 339 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 C3orf33Q6P1S2 294 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 ANKS4BQ8N8V4 417 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 WDR31Q8NA23 367 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 ZNF527Q8NB42 609 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 RFWD2Q8NHY2 731 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 CDS1Q92903 461 aa15.99■□□□□ 0.15
RAP1B-229ENST00000543393 BHLHE41Q9C0J9 482 aaPredicted RBP15.99■□□□□ 0.15
RAP1B-229ENST00000543393 MYOZ1Q9NP98 299 aaPredicted RBP15.99■□□□□ 0.15
RAP1B-229ENST00000543393 MGAM2Q2M2H8 2515 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 IGKV3D-15A0A087WSY6 115 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 ATP6V1G2-DDX39BF2Z307 99 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 H3BNH8 94 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 RSL1D1O76021 490 aaKnown RBP15.98■□□□□ 0.15
RAP1B-229ENST00000543393 ITGA5P08648 1049 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 ATP6V1C1P21283 382 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 NTF4P34130 210 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 DIO1P49895 249 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 MLC1Q15049 377 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 QPRTQ15274 297 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.98■□□□□ 0.15
RAP1B-229ENST00000543393 ABLIM2Q6H8Q1 611 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 TRIM46Q7Z4K8 759 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 ZNF540Q8NDQ6 660 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 ZMYND19Q96E35 227 aaPredicted RBP15.98■□□□□ 0.15
RAP1B-229ENST00000543393 CHMP6Q96FZ7 201 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 VRK1Q99986 396 aaPredicted RBP15.98■□□□□ 0.15
RAP1B-229ENST00000543393 HOXD1Q9GZZ0 328 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 MID1IP1Q9NPA3 183 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 MALT1Q9UDY8 824 aa15.98■□□□□ 0.15
RAP1B-229ENST00000543393 ZNF716A6NP11 495 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 ETV2O00321 342 aaPredicted RBP15.97■□□□□ 0.15
RAP1B-229ENST00000543393 VENTXO95231 258 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 ATP5F1P24539 256 aaPredicted RBP15.97■□□□□ 0.15
RAP1B-229ENST00000543393 FRKP42685 505 aaPredicted RBP15.97■□□□□ 0.15
RAP1B-229ENST00000543393 PRKAA2P54646 552 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 SNRPD2P62316 118 aaKnown RBP15.97■□□□□ 0.15
RAP1B-229ENST00000543393 PDK3Q15120 406 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 TIGD2Q4W5G0 525 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 TMPPEQ6ZT21 453 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 TMCO5AQ8N6Q1 288 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 OR5W2Q8NH69 310 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 SGMS2Q8NHU3 365 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 PPCDCQ96CD2 204 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 L3HYPDHQ96EM0 354 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 ZNF764Q96H86 408 aaPredicted RBP15.97■□□□□ 0.15
RAP1B-229ENST00000543393 STACQ99469 402 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 FUT8Q9BYC5 575 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 QRSL1Q9H0R6 528 aaKnown RBP15.97■□□□□ 0.15
RAP1B-229ENST00000543393 OCEL1Q9H607 264 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 DUSP22Q9NRW4 184 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 SH3BP4Q9P0V3 963 aa15.97■□□□□ 0.15
RAP1B-229ENST00000543393 POC1B-GALNT4F8VUJ3 575 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 SULT2B1O00204 365 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 IL2RGP31785 369 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 CCR4P51679 360 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 CSNK2A1P68400 391 aaPredicted RBP15.96■□□□□ 0.15
RAP1B-229ENST00000543393 SLC25A3Q00325 362 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 LASP1Q14847 261 aaKnown RBP15.96■□□□□ 0.15
RAP1B-229ENST00000543393 KIAA0040Q15053 153 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 C9orf135Q5VTT2 229 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 CDC73Q6P1J9 531 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 SLC46A3Q7Z3Q1 461 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 MTDHQ86UE4 582 aaKnown RBP15.96■□□□□ 0.15
RAP1B-229ENST00000543393 ZNF614Q8N883 585 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 TOR1AIP2Q8NFQ8 470 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 SEMA6DQ8NFY4 1073 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 OR52E4Q8NGH9 312 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 DCAKDQ8WVC6 231 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 ARL8AQ96BM9 186 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 FAM120BQ96EK7 910 aaKnown RBP15.96■□□□□ 0.15
RAP1B-229ENST00000543393 KCNF1Q9H3M0 494 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 PIGUQ9H490 435 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 GSTO2Q9H4Y5 243 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 REEP4Q9H6H4 257 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 ACSS1Q9NUB1 689 aaPredicted RBP15.96■□□□□ 0.15
RAP1B-229ENST00000543393 ZDHHC18Q9NUE0 388 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 MOKQ9UQ07 419 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 DTNAQ9Y4J8 743 aa15.96■□□□□ 0.15
RAP1B-229ENST00000543393 ESPNB1AK53 854 aa15.95■□□□□ 0.14
RAP1B-229ENST00000543393 NPIPB8E9PQR5 432 aa15.95■□□□□ 0.14
RAP1B-229ENST00000543393 PDLIM1O00151 329 aa15.95■□□□□ 0.14
RAP1B-229ENST00000543393 ZNF264O43296 627 aa15.95■□□□□ 0.14
RAP1B-229ENST00000543393 AKAP10O43572 662 aa15.95■□□□□ 0.14
RAP1B-229ENST00000543393 MRPL33O75394 65 aaKnown RBP15.95■□□□□ 0.14
RAP1B-229ENST00000543393 SEC22BO75396 215 aa15.95■□□□□ 0.14
RAP1B-229ENST00000543393 SLU7O95391 586 aaKnown RBP15.95■□□□□ 0.14
RAP1B-229ENST00000543393 HMGN2P05204 90 aaKnown RBP15.95■□□□□ 0.14
RAP1B-229ENST00000543393 EFNA1P20827 205 aaPredicted RBP15.95■□□□□ 0.14
RAP1B-229ENST00000543393 ATP12AP54707 1039 aa15.95■□□□□ 0.14
RAP1B-229ENST00000543393 CBFBQ13951 182 aa15.95■□□□□ 0.14
RAP1B-229ENST00000543393 ZSWIM7Q19AV6 140 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms