RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 FOXG1P55316 489 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 PHEXP78562 749 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 C17orf67Q0P5P2 114 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ZP4Q12836 540 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF155Q12901 538 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 IKZF1Q13422 519 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ODF1Q14990 250 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TBCCQ15814 346 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 FAM189A2Q15884 450 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ADRM1Q16186 407 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 CPSF6Q16630 551 aaKnown RBP eCLIP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ERCC6LQ2NKX8 1250 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TMEM176BQ3YBM2 270 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TOR2AQ5JU69 321 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TCHHL1Q5QJ38 904 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 SULT1C3Q6IMI6 304 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF771Q7L3S4 317 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ADAMTSL2Q86TH1 951 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TBC1D1Q86TI0 1168 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF786Q8N393 782 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TCAIMQ8N3R3 496 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TEX29Q8N6K0 151 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 LRRC57Q8N9N7 239 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 NEU4Q8WWR8 484 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 CPNE4Q96A23 557 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 SLC25A28Q96A46 364 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TMIGD2Q96BF3 282 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 WDR34Q96EX3 536 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 SIGLEC10Q96LC7 697 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 KLHL15Q96M94 604 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ARPC5LQ9BPX5 153 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 RBM4BQ9BQ04 359 aaKnown RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 LRRC1Q9BTT6 524 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 CXorf36Q9H7Y0 433 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 DDX31Q9H8H2 851 aaKnown RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 DYNLRB1Q9NP97 96 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TNFRSF19Q9NS68 423 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 SENP1Q9P0U3 644 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 OPTCQ9UBM4 332 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF639Q9UID6 485 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 PSME2Q9UL46 239 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ICAM5Q9UMF0 924 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ANGPTL3Q9Y5C1 460 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF780BQ9Y6R6 833 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 U3KQE9 123 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 C1orf226A1L170 272 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 G3V4G9 280 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 hCG_2039718K7EN88 272 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TIMM23O14925 209 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 PHGDHO43175 533 aaKnown RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 PPIHO43447 177 aaKnown RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 MPZL1O95297 269 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 IPO7O95373 1038 aaKnown RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 UTS2O95399 124 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 ESRRBO95718 433 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 NUDT14O95848 222 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 KRT14P02533 472 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 AMY2AP04746 511 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 ATP1B1P05026 303 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 ADRA2AP08913 450 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SAGP10523 405 aaPredicted RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 MLNP12872 115 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 AMY2BP19961 511 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TCN1P20061 433 aaPredicted RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 COL8A2P25067 703 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 GGT5P36269 586 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 PIK3CBP42338 1070 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SLC1A3P43003 542 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 MAPK12P53778 367 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SLC12A2P55011 1212 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TAS2R39P59534 338 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 MYBPC1Q00872 1141 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TEKQ02763 1124 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 RIN1Q13671 783 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 CRYMQ14894 314 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 ADIPOQQ15848 244 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 GABRA6Q16445 453 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 CCNG2Q16589 344 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 DECR1Q16698 335 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TMEM44Q2T9K0 475 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF628Q5EBL2 1059 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SGO1Q5FBB7 561 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TEDDM1Q5T9Z0 273 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 DCAF12L2Q5VW00 463 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 FBXW9Q5XUX1 488 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 STEAP3Q658P3 488 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TTC19Q6DKK2 380 aaPredicted RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 GRHL2Q6ISB3 625 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SLC48A1Q6P1K1 146 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 CCBE1Q6UXH8 406 aaPredicted RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 APOOLQ6UXV4 268 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 IKBIPQ70UQ0 350 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SSX8Q7RTT4 187 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 LRRC70Q7Z2Q7 622 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SPATA21Q7Z572 469 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 C1QL2Q7Z5L3 287 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 CNGA4Q8IV77 575 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SYCE1Q8N0S2 351 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 GTPBP8Q8N3Z3 284 aaPredicted RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TEX9Q8N6V9 391 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms