RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 PROK2Q9HC23 129 aa12.09□□□□□ -0.47
CHFR-221ENST00000542714 MEPEQ9NQ76 525 aaPredicted RBP12.09□□□□□ -0.47
CHFR-221ENST00000542714 C20orf141Q9NUB4 165 aa12.09□□□□□ -0.47
CHFR-221ENST00000542714 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
CHFR-221ENST00000542714 KLRF1Q9NZS2 232 aa12.09□□□□□ -0.47
CHFR-221ENST00000542714 CNIH4Q9P003 139 aa12.09□□□□□ -0.47
CHFR-221ENST00000542714 RPS6KB2Q9UBS0 482 aa12.09□□□□□ -0.47
CHFR-221ENST00000542714 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
CHFR-221ENST00000542714 WIF1Q9Y5W5 379 aa12.09□□□□□ -0.47
CHFR-221ENST00000542714 WDFY3Q8IZQ1 3526 aa12.08□□□□□ -0.47
CHFR-221ENST00000542714 A0A087WUJ7 227 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 ANKUB1A6NFN9 424 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 TP53I11O14683 189 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 GNB5O14775 395 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 NKX2-8O15522 239 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 OSMP13725 252 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 PGCP20142 388 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 SPINK2P20155 84 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 MAKP20794 623 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 SDHBP21912 280 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 FPR3P25089 353 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 GPR4P46093 362 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 COPZ1P61923 177 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 MYBPC1Q00872 1141 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 C17orf67Q0P5P2 114 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 TSPAN31Q12999 210 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 AIMP2Q13155 320 aaKnown RBP12.08□□□□□ -0.48
CHFR-221ENST00000542714 RAPSNQ13702 412 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 KEAP1Q14145 624 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 ZNF227Q86WZ6 799 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 CCDC71Q8IV32 467 aaPredicted RBP12.08□□□□□ -0.48
CHFR-221ENST00000542714 P3H2Q8IVL5 708 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 RNF113BQ8IZP6 322 aaKnown RBP12.08□□□□□ -0.48
CHFR-221ENST00000542714 BEST3Q8N1M1 668 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 TMEM156Q8N614 296 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 RNF217Q8TC41 542 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 PAQR8Q8TEZ7 354 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 DNAJA4Q8WW22 397 aaPredicted RBP12.08□□□□□ -0.48
CHFR-221ENST00000542714 GATA6Q92908 595 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 MPP4Q96JB8 637 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 HS6ST2Q96MM7 605 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 FRMD6Q96NE9 622 aa12.08□□□□□ -0.48
CHFR-221ENST00000542714 NR1H4Q96RI1 486 aaPredicted RBP12.08□□□□□ -0.48
CHFR-221ENST00000542714 SECISBP2Q96T21 854 aaKnown RBP12.08□□□□□ -0.48
CHFR-221ENST00000542714 NCKAP5O14513 1909 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 KPNA4O00629 521 aaPredicted RBP12.07□□□□□ -0.48
CHFR-221ENST00000542714 CDC42EP2O14613 210 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 SOX14O95416 240 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 IFI30P13284 250 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 CHMP24386 653 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 ITPKBP27987 946 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 GGT2P36268 569 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 IFNGR2P38484 337 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 SLC1A3P43003 542 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 CRISP1P54107 249 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 SUMO3P55854 103 aaPredicted RBP12.07□□□□□ -0.48
CHFR-221ENST00000542714 CTBP2P56545 445 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 RPP38P78345 283 aaKnown RBP12.07□□□□□ -0.48
CHFR-221ENST00000542714 ALDH6A1Q02252 535 aaKnown RBP12.07□□□□□ -0.48
CHFR-221ENST00000542714 IL18R1Q13478 541 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 CBFBQ13951 182 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 QPRTQ15274 297 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 INPP5JQ15735 1006 aaPredicted RBP12.07□□□□□ -0.48
CHFR-221ENST00000542714 MEP1AQ16819 746 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 CTU2Q2VPK5 515 aaKnown RBP12.07□□□□□ -0.48
CHFR-221ENST00000542714 PRAMEF20Q5VT98 475 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 OR5M10Q6IEU7 315 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 ISLR2Q6UXK2 745 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 FADS6Q8N9I5 356 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 OR2M3Q8NG83 312 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 HRASLS5Q96KN8 279 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 FER1L6-AS2Q96M78 137 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 CCNL2Q96S94 520 aaPredicted RBP12.07□□□□□ -0.48
CHFR-221ENST00000542714 ANGPTL4Q9BY76 406 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 LHPPQ9H008 270 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 C12orf10Q9HB07 376 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 CPNE5Q9HCH3 593 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 ATP13A2Q9NQ11 1180 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 HPF1Q9NWY4 346 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 MED11Q9P086 117 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 PPP4R1LQ9P1A2 415 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 MED31Q9Y3C7 131 aa12.07□□□□□ -0.48
CHFR-221ENST00000542714 ARGFXA6NJG6 315 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 ZAR1LA6NP61 321 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 CDC40O60508 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHFR-221ENST00000542714 GP1BBP13224 206 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 FUT1P19526 365 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 GSTM3P21266 225 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 ITGA3P26006 1051 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 TACR3P29371 465 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 HLCSP50747 726 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 CHN2P52757 468 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 DLX5P56178 289 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 ISL1P61371 349 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 ESRRGP62508 458 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 COX10Q12887 443 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 SNTA1Q13424 505 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 TMEM236Q5W0B7 351 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 LAIR2Q6ISS4 152 aa12.06□□□□□ -0.48
CHFR-221ENST00000542714 SLC30A6Q6NXT4 461 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms