RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 AP3M1Q9Y2T2 418 aa12.39□□□□□ -0.43
TNFSF13B-206ENST00000542136 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
TNFSF13B-206ENST00000542136 PCNX1Q96RV3 2341 aa12.39□□□□□ -0.43
TNFSF13B-206ENST00000542136 FLNBO75369 2602 aaKnown RBP12.39□□□□□ -0.43
TNFSF13B-206ENST00000542136 ICE1Q9Y2F5 2266 aa12.39□□□□□ -0.43
TNFSF13B-206ENST00000542136 A1L4Q6 167 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SLC22A20A6NK97 555 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 FXYD1O00168 92 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 MRASO14807 208 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SERPINB7O75635 380 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 PABPC4LP0CB38 370 aaKnown RBP12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 PRKAR1BP31321 381 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 PEX19P40855 299 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SLC1A3P43003 542 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 CCR4P51679 360 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 FOXF1Q12946 379 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 CDSNQ15517 529 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 C3orf33Q6P1S2 294 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF550Q7Z398 422 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 GRINAQ7Z429 371 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SNX32Q86XE0 403 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 UBQLNLQ8IYU4 475 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 C10orf111Q8N326 155 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 ANKS4BQ8N8V4 417 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 OR5M1Q8NGP8 315 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 KLHL15Q96M94 604 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 NPAS1Q99742 590 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SPOCK3Q9BQ16 436 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SFXN3Q9BWM7 321 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 ADAM19Q9H013 955 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 RNF122Q9H9V4 155 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SLC24A3Q9HC58 644 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 GP6Q9HCN6 339 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 GLRX2Q9NS18 164 aa12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 FOXD3Q9UJU5 478 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF443Q9Y2A4 671 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 SPIN1Q9Y657 262 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 UTP20O75691 2785 aaKnown RBP12.38□□□□□ -0.43
TNFSF13B-206ENST00000542136 HEATR5AQ86XA9 2040 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 HECTD1Q9ULT8 2610 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 A0A0J9YW62 118 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 LOC100653049A0A140TA62 436 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 CLDN24A6NM45 220 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 KDM4EB2RXH2 506 aaPredicted RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 SHISA8B8ZZ34 492 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 PRSS44E7EML9 344 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 SYT5O00445 386 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 BCAS1O75363 584 aaPredicted RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 CYP7B1O75881 506 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 KRT34O76011 436 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 C8BP07358 591 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 COX4I1P13073 169 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 TCEA1P23193 301 aaKnown RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 PRDX6P30041 224 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 ACAA2P42765 397 aaKnown RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 GZMMP51124 257 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF136P52737 540 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 PCBP3P57721 371 aaKnown RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 CARD18P57730 90 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 GNGT1P63211 74 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 TFF3Q07654 80 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 EPS8Q12929 822 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 SCARB2Q14108 478 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 SGCBQ16585 318 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF311Q5JNZ3 666 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 INTS11Q5TA45 600 aaKnown RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 HBMQ6B0K9 141 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 REP15Q6BDI9 236 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 GTF2IRD2BQ6EKJ0 949 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 DHRS4L2Q6PKH6 230 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF836Q6ZNA1 936 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 PLEKHM3Q6ZWE6 761 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 ARPINQ7Z6K5 226 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 MTDHQ86UE4 582 aaKnown RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 GTF2IRD2Q86UP8 949 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 CALHM3Q86XJ0 350 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 VRK2Q86Y07 508 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 PTOV1Q86YD1 416 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 C9orf106Q8NAJ2 232 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 OR10D3Q8NH80 312 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 OR2V1Q8NHB1 315 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 NFKBIDQ8NI38 313 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 OSTF1Q92882 214 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 CPNE4Q96A23 557 aaPredicted RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 CMTM5Q96DZ9 223 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 LRRC46Q96FV0 321 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 PINK1Q9BXM7 581 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 ENKD1Q9H0I2 346 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 PIGMQ9H3S5 423 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 EFCAB1Q9HAE3 211 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 RLIMQ9NVW2 624 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 JKAMPQ9P055 326 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 MCTS1Q9ULC4 181 aaKnown RBP12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 ANGPT4Q9Y264 503 aa12.37□□□□□ -0.43
TNFSF13B-206ENST00000542136 MED12Q93074 2177 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 H0YC42 278 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 EIF1AYO14602 144 aaKnown RBP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 SEC14L5O43304 696 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms