RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ARRB1P49407 418 aaPredicted RBP14.98□□□□□ -0.01
VARS2-212ENST00000542001 AP3S2P59780 193 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 GMFBP60983 142 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 SCRN3Q0VDG4 424 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 TBC1D20Q96BZ9 403 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 NKX3-1Q99801 234 aaPredicted RBP14.98□□□□□ -0.01
VARS2-212ENST00000542001 C1QTNF2Q9BXJ5 285 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 A4GALTQ9NPC4 353 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 C14orf105Q9NVL8 296 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 ZNF638Q14966 1978 aaKnown RBP14.98□□□□□ -0.01
VARS2-212ENST00000542001 RIF1Q5UIP0 2472 aaKnown RBP14.98□□□□□ -0.01
VARS2-212ENST00000542001 A0A1B0GW55 424 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 FGF17O60258 216 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 PROS1P07225 676 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 DUX4L2P0CJ85 424 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 DUX4L3P0CJ86 424 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 DUX4L4P0CJ87 422 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 DUX4L5P0CJ88 424 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 DUX4L6P0CJ89 424 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 DUX4L7P0CJ90 424 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 GTF2F2P13984 249 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 PSMA6P60900 246 aaKnown RBP14.98□□□□□ -0.01
VARS2-212ENST00000542001 ARFRP1Q13795 201 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 GRM7Q14831 915 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 KCTD9Q7L273 389 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 CEP76Q8TAP6 659 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 APH1BQ8WW43 257 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 GCDHQ92947 438 aaPredicted RBP14.98□□□□□ -0.01
VARS2-212ENST00000542001 SNAPC3Q92966 411 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 TSSK2Q96PF2 358 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 KATNB1Q9BVA0 655 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 DUX4Q9UBX2 424 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 MGAT4AQ9UM21 535 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 A0A0G2JMP0 313 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 A0A0X1KG70 313 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 C13orf42A0A1B0GVH6 325 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 A0A1B0GWA3 101 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 LGI1O95970 557 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 PCMT1P22061 227 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 ITGA3P26006 1051 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 AQP2P41181 271 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 FXYD6P3P58550 94 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 PRKCDQ05655 676 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 SHHQ15465 462 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 ALG11Q2TAA5 492 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 NKAIN2Q5VXU1 208 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 ADAMTSL4Q6UY14 1074 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 GDPGP1Q6ZNW5 385 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 OR4M2Q8NGB6 313 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 SLC37A2Q8TED4 501 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 MAP3K3Q99759 626 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 PLEKHA6Q9Y2H5 1048 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 PCYT1BQ9Y5K3 369 aaPredicted RBP14.97□□□□□ -0.01
VARS2-212ENST00000542001 TMEM72A0PK05 275 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 MPEG1Q2M385 716 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 GPALPP1Q8IXQ4 340 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 TIMM29Q9BSF4 260 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 GABARAPL3Q9BY60 117 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 ATG5Q9H1Y0 275 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 CCDC59Q9P031 241 aaKnown RBP14.97□□□□□ -0.01
VARS2-212ENST00000542001 LCTP09848 1927 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 CDHR4A6H8M9 788 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 MAN2B1O00754 1011 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 PDCD5O14737 125 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 HOXC11O43248 304 aaPredicted RBP14.97□□□□□ -0.01
VARS2-212ENST00000542001 H2AFB2P0C5Z0 115 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 AKR1D1P51857 326 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 ADPRHP54922 357 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 MEPCEQ7L2J0 689 aaKnown RBP14.97□□□□□ -0.01
VARS2-212ENST00000542001 TMEM151BQ8IW70 566 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 EPHX3Q9H6B9 360 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 C5orf51A6NDU8 294 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 L7N2F9 121 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 FABP5Q01469 135 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 IFITM3Q01628 133 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 NFATC4Q14934 902 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 P2RY14Q15391 338 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 NKPD1Q17RQ9 610 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 PLK5Q496M5 336 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 NOXA1Q86UR1 476 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 SLITRK4Q8IW52 837 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 SFTPA2Q8IWL1 248 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 SIMC1Q8NDZ2 872 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 COQ8AQ8NI60 647 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 MSANTD3Q96H12 275 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 ISG20L2Q9H9L3 353 aaKnown RBP14.97□□□□□ -0.01
VARS2-212ENST00000542001 GPATCH2Q9NW75 528 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 ALKBH4Q9NXW9 302 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 MGAT4CQ9UBM8 478 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 SPEF1Q9Y4P9 236 aa14.97□□□□□ -0.01
VARS2-212ENST00000542001 TRAV18A0A075B6X5 111 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 ZNF24P17028 368 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 OR10A3P58181 314 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 TNFRSF17Q02223 184 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 NXNL2Q5VZ03 156 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 ARHGAP11AQ6P4F7 1023 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 PAQR7Q86WK9 346 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 RASD2Q96D21 266 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 OR14A2Q96R54 314 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 ZMAT3Q9HA38 289 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms