RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ESRRBO95718 433 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 MBD3O95983 291 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 ITGA5P08648 1049 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 MPGP29372 298 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 LCN1P31025 176 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 RAD52P43351 418 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 PIK3CGP48736 1102 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 CPSF6Q16630 551 aaKnown RBP eCLIP8.14□□□□□ -1.11
YBX3-211ENST00000541351 VPS26BQ4G0F5 336 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 GLE1Q53GS7 698 aaKnown RBP8.14□□□□□ -1.11
YBX3-211ENST00000541351 FBXO48Q5FWF7 155 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 ELFN2Q5R3F8 820 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 C3orf33Q6P1S2 294 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 GAS2L3Q86XJ1 694 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 RNF175Q8N4F7 328 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 ATP6V1C2Q8NEY4 427 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 ST7LQ8TDW4 575 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 CNRIP1Q96F85 164 aaPredicted RBP8.14□□□□□ -1.11
YBX3-211ENST00000541351 TSPAN17Q96FV3 270 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 MRGPRX4Q96LA9 322 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 MRI1Q9BV20 369 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 RTN4RQ9BZR6 473 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 ZNF385DQ9H6B1 395 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 COQ10BQ9H8M1 238 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 ANKZF1Q9H8Y5 726 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 LMBRD1Q9NUN5 540 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 NUDT4Q9NZJ9 180 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 ZNF69Q9UC07 566 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 PACSIN2Q9UNF0 486 aaPredicted RBP8.14□□□□□ -1.11
YBX3-211ENST00000541351 AUP1Q9Y679 476 aa8.14□□□□□ -1.11
YBX3-211ENST00000541351 A0A087WV62 115 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 IGHV1-18A0A0C4DH31 117 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 FAM95CA0A1B0GW59 222 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 CCDC151A5D8V7 595 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 H3BNH8 94 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 DHHO43323 396 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 FOXH1O75593 365 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 CLPXO76031 633 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 HSPA4LO95757 839 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 LINGO3P0C6S8 592 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 MYZAPP0CAP1 466 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 FAM157BP0CG42 384 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 SHC1P29353 583 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 MAGEA3P43357 314 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 SUMO3P55854 103 aaPredicted RBP8.13□□□□□ -1.11
YBX3-211ENST00000541351 FOXF1Q12946 379 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 SLC29A2Q14542 456 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 GRAMD1BQ3KR37 738 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 TEDDM1Q5T9Z0 273 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 CASP12Q6UXS9 341 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 MTDHQ86UE4 582 aaKnown RBP8.13□□□□□ -1.11
YBX3-211ENST00000541351 FAM169BQ8N8A8 192 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 OR9A2Q8NGT5 310 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 WDR20Q8TBZ3 569 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 POC1BQ8TC44 478 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 ZNF75CPQ92670 426 aaPredicted RBP8.13□□□□□ -1.11
YBX3-211ENST00000541351 ANP32BQ92688 251 aaKnown RBP8.13□□□□□ -1.11
YBX3-211ENST00000541351 ZDHHC16Q969W1 377 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 SH3YL1Q96HL8 342 aaPredicted RBP8.13□□□□□ -1.11
YBX3-211ENST00000541351 HES6Q96HZ4 224 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 SIGLEC10Q96LC7 697 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 ZNF681Q96N22 645 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 SERINC1Q9NRX5 453 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 NSMCE4AQ9NXX6 385 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 FLRT3Q9NZU0 649 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 OPN4Q9UHM6 478 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 GPR160Q9UJ42 338 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 ZNF346Q9UL40 294 aaKnown RBP8.13□□□□□ -1.11
YBX3-211ENST00000541351 TFR2Q9UP52 801 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 SLC9A8Q9Y2E8 581 aa8.13□□□□□ -1.11
YBX3-211ENST00000541351 AGAP5A6NIR3 686 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 OR6C65A6NJZ3 312 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 CXorf49A8MYA2 514 aaPredicted RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 SULT2B1O00204 365 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 OXSR1O95747 527 aaPredicted RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 IGHV2-5P01817 119 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 CDH2P19022 906 aaPredicted RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 COL8A2P25067 703 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 EDNRAP25101 427 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 THBS4P35443 961 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 ARL1P40616 181 aaPredicted RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 MAGEA8P43361 318 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 PGGT1BP53609 377 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 RPS23P62266 143 aaKnown RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 IFT88Q13099 833 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 C9orf135Q5VTT2 229 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 TTC19Q6DKK2 380 aaPredicted RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 ABLIM2Q6H8Q1 611 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 C11orf87Q6NUJ2 197 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 ANKRD16Q6P6B7 361 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 WDFY1Q8IWB7 410 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 CDK20Q8IZL9 346 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 TEX9Q8N6V9 391 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 POMGNT2Q8NAT1 580 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 GLB1L3Q8NCI6 653 aaPredicted RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 OR7G2Q8NG99 324 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 FBXO27Q8NI29 283 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 STAG3L4Q8TBR4 150 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 UBTD2Q8WUN7 234 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 ANKRD49Q8WVL7 239 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms