RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PTSQ03393 145 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 RPA4Q13156 261 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 GPR176Q14439 515 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 DECR1Q16698 335 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 ARHGAP40Q5TG30 622 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 B3GNTL1Q67FW5 361 aaPredicted RBP9.67□□□□□ -0.86
CHFR-219ENST00000541341 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 TMIGD1Q6UXZ0 262 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 DEF8Q6ZN54 512 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 RTL4Q6ZR62 310 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 C6orf120Q7Z4R8 191 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 COMMD7Q86VX2 200 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 SPACA3Q8IXA5 215 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 SAMD14Q8IZD0 417 aaPredicted RBP9.67□□□□□ -0.86
CHFR-219ENST00000541341 RNF113BQ8IZP6 322 aaKnown RBP9.67□□□□□ -0.86
CHFR-219ENST00000541341 SPICQ8N5J4 248 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 ACBD7Q8N6N7 88 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 ARIH2OSQ8N7S6 290 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 FAM71CQ8NEG0 241 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 OR13H1Q8NG92 308 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 OR4K1Q8NGD4 311 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 OR56A1Q8NGH5 318 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 OR9A1PQ8NGU1 263 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 THRSPQ92748 146 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 RBPMSQ93062 196 aaKnown RBP9.67□□□□□ -0.86
CHFR-219ENST00000541341 UPRTQ96BW1 309 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 RNF31Q96EP0 1072 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 TMEM19Q96HH6 336 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 AHCYL2Q96HN2 611 aaKnown RBP9.67□□□□□ -0.86
CHFR-219ENST00000541341 SLC35G5Q96KT7 338 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 COQ10AQ96MF6 247 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 SMIM14Q96QK8 99 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 WACQ9BTA9 647 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 HDHD5Q9BXW7 423 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 TMPRSS13Q9BYE2 586 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 DPEP2Q9H4A9 486 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 BABAM2Q9NXR7 383 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 TAS2R16Q9NYV7 291 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 CAMK2AQ9UQM7 478 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 NPTNQ9Y639 398 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 CLCA3PQ9Y6N3 262 aa9.67□□□□□ -0.86
CHFR-219ENST00000541341 PTPRQQ9UMZ3 2332 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 A0A0A6YYJ9 748 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 TRAV1-2A0A0B4J238 106 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SLC22A31A6NKX4 558 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 J3KTA2 159 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 AGRPO00253 132 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 ATXN7O15265 892 aaPredicted RBP9.66□□□□□ -0.86
CHFR-219ENST00000541341 YY2O15391 372 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 YKT6O15498 198 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 GATBO75879 557 aaKnown RBP9.66□□□□□ -0.86
CHFR-219ENST00000541341 PCDH8O95206 1070 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 C1SP09871 688 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SULT1A3P0DMM9 295 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SULT1A4P0DMN0 295 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 PLA2G2AP14555 144 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 CD22P20273 847 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 KELP23276 732 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 IMPA1P29218 277 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 FAUP35544 74 aaKnown RBP9.66□□□□□ -0.86
CHFR-219ENST00000541341 LIM2P55344 173 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 RPS25P62851 125 aaKnown RBP9.66□□□□□ -0.86
CHFR-219ENST00000541341 RPS21P63220 83 aaKnown RBP9.66□□□□□ -0.86
CHFR-219ENST00000541341 GABREP78334 506 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 B4GALNT1Q00973 533 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 FABP5Q01469 135 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 ILF3Q12906 894 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHFR-219ENST00000541341 SLBPQ14493 270 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHFR-219ENST00000541341 MFSD13AQ14CX5 517 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 RTP5Q14D33 572 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 PTPRRQ15256 657 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 TCEA2Q15560 299 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 MAPK14Q16539 360 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 AANATQ16613 207 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 TMEM35AQ53FP2 167 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 EIPR1Q53HC9 387 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 LRRC73Q5JTD7 316 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 ELFN2Q5R3F8 820 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 FAM205BPQ63HN1 556 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 RAET1GQ6H3X3 334 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 PODNL1Q6PEZ8 512 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 PCSK4Q6UW60 755 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 PLEKHM3Q6ZWE6 761 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 ZNF765Q7L2R6 523 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 TECPR1Q7Z6L1 1165 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 TMPRSS11BQ86T26 416 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SLC9B2Q86UD5 537 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 TSPAN33Q86UF1 283 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 GPAT4Q86UL3 456 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 NUDT13Q86X67 352 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SPNS2Q8IVW8 549 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 CCDC36Q8IYA8 594 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 CDK20Q8IZL9 346 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SDR16C5Q8N3Y7 309 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 ZNF843Q8N446 348 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 GPR156Q8NFN8 814 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 OR52L1Q8NGH7 329 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 GATAD2BQ8WXI9 593 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 FGF11Q92914 225 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 RAD51AP1Q96B01 352 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms