RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 CLUP10909 449 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 EPXP11678 715 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 BSGP35613 385 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 POLR2LP62875 67 aaKnown RBP13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 TRAM2Q15035 370 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 C2orf68Q2NKX9 166 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 ZNF311Q5JNZ3 666 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 METTL11BQ5VVY1 283 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 ZNF620Q6ZNG0 422 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 TPRA1Q86W33 373 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 CMTM4Q8IZR5 234 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 RFLNBQ8N5W9 214 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 HERVK_113Q902F9 699 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 DIO2Q92813 273 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 RGMAQ96B86 450 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 LRRC46Q96FV0 321 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 PGLYRP3Q96LB9 341 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 DERL3Q96Q80 235 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 SLC38A3Q99624 504 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 FXYD6Q9H0Q3 95 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 OR51V1Q9H2C8 321 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 NOX3Q9HBY0 568 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 POLMQ9NP87 494 aaPredicted RBP13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 EXOSC3Q9NQT5 275 aaKnown RBP13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
AC005840.4-201ENST00000541242 SCN2AQ99250 2005 aa13.77□□□□□ -0.2
AC005840.4-201ENST00000541242 B3GALNT1O75752 331 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 SPDEFO95238 335 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 WDPCPO95876 746 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 UCHL1P09936 223 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 GABRA1P14867 456 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 C4BPBP20851 252 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 IFNGR2P38484 337 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 RECQLP46063 649 aaPredicted RBP13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 HCCSP53701 268 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 BDH1Q02338 343 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 DYRK1AQ13627 763 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 GNA13Q14344 377 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 LINC00303Q3SY05 128 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 NIPAL3Q6P499 406 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 OR2T33Q8NG76 320 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 ZNF671Q8TAW3 534 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 ZDHHC1Q8WTX9 485 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 GHSRQ92847 366 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 PELOQ9BRX2 385 aaKnown RBP13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 EQTNQ9NQ60 294 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 LHX9Q9NQ69 397 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 SLC35C2Q9NQQ7 365 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 CAMK2AQ9UQM7 478 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 XIRP2A4UGR9 3374 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 SPTBP11277 2137 aa13.77□□□□□ -0.21
AC005840.4-201ENST00000541242 A0A1W2PS29 197 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 OR2M5A3KFT3 312 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 PLPP2O43688 288 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 ZGLP1P0C6A0 271 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 CTNNB1P35222 781 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 SEC61A1P61619 476 aaKnown RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 MESP2Q0VG99 397 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 ZDHHC20Q5W0Z9 365 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 GLDNQ6ZMI3 551 aaPredicted RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 SSX6Q7RTT6 188 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 GRASPQ7Z6J2 395 aaPredicted RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 PXKQ7Z7A4 578 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 OR5M1Q8NGP8 315 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 C12orf57Q99622 126 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 C7orf50Q9BRJ6 194 aaKnown RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 UBQLN3Q9H347 655 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 FBXL4Q9UKA2 621 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 INSL6Q9Y581 213 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 COL4A3Q01955 1670 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 MDC1Q14676 2089 aaKnown RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 A0A1B0GUH1 482 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 SYNDIG1LA6NDD5 238 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 D6RAR5 112 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 SDC3O75056 442 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 HMGN2P05204 90 aaKnown RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 GIPP09681 153 aaPredicted RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 SYN1P17600 705 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 PYCR1P32322 319 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 PRLHRP49683 370 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 KHDRBS2Q5VWX1 349 aaKnown RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 C18orf63Q68DL7 685 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 ZNF613Q6PF04 617 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 FAM98AQ8NCA5 519 aaKnown RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 OR9A1PQ8NGU1 263 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 SPPL3Q8TCT6 385 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 GIMAP5Q96F15 307 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 LCORQ96JN0 433 aaPredicted RBP13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 GINS4Q9BRT9 223 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 NDC1Q9BTX1 674 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 SLC6A20Q9NP91 592 aa13.76□□□□□ -0.21
AC005840.4-201ENST00000541242 CDHR4A6H8M9 788 aa13.75□□□□□ -0.21
AC005840.4-201ENST00000541242 OR6C65A6NJZ3 312 aa13.75□□□□□ -0.21
AC005840.4-201ENST00000541242 SC5DO75845 299 aa13.75□□□□□ -0.21
AC005840.4-201ENST00000541242 MT-ND5P03915 603 aa13.75□□□□□ -0.21
AC005840.4-201ENST00000541242 GYPBP06028 91 aa13.75□□□□□ -0.21
AC005840.4-201ENST00000541242 METAP1P53582 386 aa13.75□□□□□ -0.21
AC005840.4-201ENST00000541242 ST3GAL3Q11203 375 aa13.75□□□□□ -0.21
AC005840.4-201ENST00000541242 GK2Q14410 553 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms